US2023090487A1PendingUtilityA1

Therapeutic Anti-IgE Antibodies and Methods and Compositions Thereof

Assignee: UNIV CALIFORNIAPriority: Jan 6, 2017Filed: Oct 29, 2022Published: Mar 23, 2023
Est. expiryJan 6, 2037(~10.4 yrs left)· nominal 20-yr term from priority
A61P 37/06A61P 37/08C07K 2317/56C07K 2317/24C07K 16/4291C07K 2317/76C07K 2317/92A61K 2039/505
68
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Claims

Abstract

Disclosed herein are anti-IgE antibodies having low binding affinity to human IgE and compositions and methods thereof.

Claims

exact text as granted — not AI-modified
1 - 20 . (canceled) 
     
     
         21 . A monoclonal antibody, which comprises
 (1) a VH chain comprising   
       
         
           
                 
               
                   (SEQ ID NO: 15) 
                 
                   (X) 0-1 VQLXQSG(X) 5 PGXS(X) 3 SCXASGXTF(X) 6 WVRQAPGXGLEW(X) 3   
                 
                   I(X) 4 G(X) 3 Y(X) 6 R(X) 5 DXS(X) 2 T(X) 6 SL(X) 3 DTAVYYCAR(X) 9-11   
                 
                   WGXGTXVTVSSAS, 
                 
             
                
                
                
                
               
            
           
         
         
           wherein each X is independently any amino acid, and the VH chain contains a region that has 100% sequence identity to PGX2SX3X4X5SCX6ASGX7TF (SEQ ID NO: 18), wherein X2 is A or R, X3 is L or V, X4 is K or R, X5 is L or V, X6 is A or K, and X7 is F or Y; and 
         
         (2) an amino acid sequence comprising 
       
       
         
           
                 
                 
               
                   (a) 
                     
                 
                   (SEQ ID NO: 16) 
                     
                 
                   (X) 4 TQ(X) 0-1 PXS(X) 3 SXG(X) 3 TIXC(X) 2-3 S(X)V(X) 9-11 Q(X) 2 PG(X) 2 PKLXIY(X) 2-4   
                     
                 
                     
                 
                   S(X) 3 S(X) 2-4 RFSGSXSG(X) 4 LTXSXLQAEDXAXYYC(X) 0-2 Q(X) 6-8 FGXGTKL(X) 3-7   
                 
                     
                 
                   AAPSV(X) 2 FPPSXEXL(X) 4 A(X) 2 VCL(X) 3 FYP(X) 4 VXWKXD(X) 5-6 G(X) 1-3 E(X) 2 T(X) 8   
                 
                     
                 
                   Y(X) 2 SSXLXL(X) 7 H(X) 2 YXCXVTHXG(X) 0-2 SXVXK(X) 5 EC(X) 0-1 , 
                 
             
                
                
                
                
                
                
                
                
                
               
            
           
         
         
           wherein each X is independently any amino acid; 
         
       
       
         
           
                 
               
                   (b) 
                 
                   (SEQ ID NO: 32) 
                 
                   DIVMTQSPDSLAVSLGERATINCRASQSVSTSX56HSYMHWYQQKPGQP 
                 
                     
                 
                   PKLLIYYASNLX57X58GVPDRFSGSGSGTDFTLTISSLQAEDVAVYYC 
                 
                     
                 
                   QHSWEIPWTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLN 
                 
                     
                 
                   NFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADY 
                 
                     
                 
                   EKHKVYACEVTHQGLSSPVTKSFNRGEC, wherein X56 is A or 
                 
                     
                 
                   S, X57 is E or K, X58 is A or S; 
                 
                     
                 
                   (c) 
                 
                   (SEQ ID NO: 63) 
                 
                   DIVMTQSPDSLAVSLGERATINCRASQSVSTSSYSYMHWYQQKPGQPPK 
                 
                     
                 
                   LLIYYASNLKAGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQHSWEI 
                 
                     
                 
                   PWTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPRE 
                 
                     
                 
                   AKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVY 
                 
                     
                 
                   ACEVTHQGLSSPVTKSFNRGEC; 
                 
                   or 
                 
                     
                 
                   (d) 
                 
                   (SEQ ID NO: 65) 
                 
                   QSAVTQPPSASGSPGQSVTISCTGTSSDVGAYDYVSWYQQHPGKAPKLM 
                 
                     
                 
                   IYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGRVD 
                 
                     
                 
                   VFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAV 
                 
                     
                 
                   TVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSC 
                 
                     
                 
                   QVTHEGSTVEKTVAPTECS. 
                 
             
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
               
            
           
         
       
     
     
         22 . The monoclonal antibody according to  claim 21 , wherein the VH chain contains a region having 100% sequence identity to any one or more of the following sequences 
       
         
           
                 
                 
               
                     
                   (SEQ ID NO: 17) 
                 
                     
                   VQLX1QSG, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 19) 
                 
                     
                   WVRQAPGX8GLEW, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 20) 
                 
                     
                   WGX9GTX10VTVSSA, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 21) 
                 
                     
                   SLX11X12X13DTAVYYCAR, 
                 
                     
                   and 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 22) 
                 
                     
                   RX14X15X16X17X18DX19SX20X21T, 
                 
             
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
               
            
           
         
         wherein X1 to X21 are each independently any amino acid. 
       
     
     
         23 . The monoclonal antibody according to  claim 21 , wherein the VH chain contains a region having 100% sequence identity to any one or more of the following sequences 
       
         
           
                 
                 
               
                     
                   (SEQ ID NO: 17) 
                 
                     
                   VQLX1QSG, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 18) 
                 
                     
                   PGX2SX3X4X5SCX6ASGX7TF, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 19) 
                 
                     
                   WVRQAPGX8GLEW, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 20) 
                 
                     
                   WGX9GTX10VTVSSA, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 21) 
                 
                     
                   SLX11X12X13DTAVYYCAR, 
                 
                     
                   and 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 22) 
                 
                     
                   RX14X15X16X17X18DX19SX20X21T, 
                 
             
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
               
            
           
         
         wherein X1 is V or G, X2 is A or R, X3 is L or V, X4 is K or R, X5 is L or V, X6 is A or K, X7 is F or Y, X8 is K or Q, X9 is R or Q, X10 is L or T, X11 is T, K, or R, X12 is A or S, X13 is E or D, X14 is F or V, X15 is T or V, X16 is I, F, or M, X17 is S or T, X18 is L, R, or T, X19 is N or T, X20 is K, T, or V, and X21 is N or S. 
       
     
     
         24 . The monoclonal antibody according to  claim 21 , wherein
 (1) the VH chain is QVQLVQSGSELKKPGASVKVSCKASGYTFTNYGMNWVRQAPGQGLEWMGWINTYTGEPTYAD DFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARGAASHTMDYWGQGTTVTVSSAS (SEQ ID NO: 68) or the VH chain is provided as part of a sequence having a percent identity of about 75% to about 100% to QVQLVQSGSELKKPGASVKVSCKASGYTFTNYGMNWVRQAPGQGLEWMGWINTYTGEPTYAD DFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARGAASHTMDYWGQGTTVTVSSASTKGP SVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW (SEQ ID NO: 2); and   (2) the amino acid sequence contains a region having 100% sequence identity to a sequence selected from the group consisting of   
       
         
           
                 
                 
               
                     
                   (SEQ ID NO: 4) 
                 
                     
                   YMHWYQQKPGQPPKLLIYYASNLESGVPDRFSGS, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 5) 
                 
                     
                   YMHWYQQKPGQPPKLLIYYASNLKAGVPDRFSGS, 
                 
                     
                   and 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 6) 
                 
                     
                   YVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGS. 
                 
             
                
                
                
                
                
                
                
                
                
               
            
           
         
       
     
     
         25 . The monoclonal antibody according to  claim 24 , wherein the VH chain is 
       
         
           
                 
               
                   (SEQ ID NO: 68) 
                 
                   QVQLVQSGSELKKPGASVKVSCKASGYTETNYGMNWVRQAPGQGLEWMG 
                 
                   WINTYTGEPTYADDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCAR 
                 
                   GAASHTMDYWGQGTTVTVSSAS, 
                 
                     
                 
                   (SEQ ID NO: 69) 
                 
                   QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMG 
                 
                   WISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAR 
                 
                   VSSWPYWYFDLWGRGTLVTVSSAS, 
                 
                   or 
                 
                     
                 
                   (SEQ ID NO: 70) 
                 
                   QVQLGQSGGGWQPGRSLRLSCAASGFTFSNYLIEWVRQAPGKGLEWVAV 
                 
                   INPGSGFTKYNEKFKQRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARE 
                 
                   DVYSWFAYWGQGTLVTVSAVTVSSAS. 
                 
             
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
               
            
           
         
       
     
     
         26 . The monoclonal antibody according to  claim 24 , wherein the VH chain is provided as part of a sequence having a percent identity of at least about 90% up to 100% to 
       
         
           
                 
               
                   (SEQ ID NO: 1) 
                 
                   QVQLVQSGSELKKPGASVKVSCKASGYTETNYGMNWVRQAPGQGLEWMG 
                 
                     
                 
                   WINTYTGEPTYADDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCAR 
                 
                     
                 
                   GAASHTMDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV 
                 
                     
                 
                   KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT 
                 
                     
                 
                   QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFP 
                 
                     
                 
                   PKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE 
                 
                     
                 
                   EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQ 
                 
                     
                 
                   PREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNY 
                 
                     
                 
                   KTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKS 
                 
                     
                 
                   LSLSPGK. 
                 
             
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
               
            
           
         
       
     
     
         27 . The monoclonal antibody according to  claim 21 , wherein the amino acid sequence contains a region that has 100% sequence identity to any one or more of the following sequences 
       
         
           
                 
                 
               
                     
                   (SEQ ID NO: 24) 
                 
                     
                   RFSGSX22SG, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 25) 
                 
                     
                   LTX23SX24LQAEDX254AX26YY, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 26) 
                 
                     
                   FGX27GTKL, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 27) 
                 
                     
                   AAPSVX28X29FPPSX30EX31L, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 28) 
                 
                     
                   AX32X33VCLX34X35X36FYP, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 29) 
                 
                     
                   HX37X38YX39CX40VTHX41G, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 30) 
                 
                     
                   PX42SX43X44X45SX45GX47X48X49TIX50C, 
                 
                     
                   and 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 31) 
                 
                     
                   QX51X52PGX53X54PKLX55IY, 
                 
             
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
               
            
           
         
         wherein X22 to X55 are each independently any amino acid. 
       
     
     
         28 . The monoclonal antibody according to  claim 21 , wherein the amino acid sequence contains a region that has 100% sequence identity to any one or more of the following sequences 
       
         
           
                 
                 
               
                     
                   (SEQ ID NO: 24) 
                 
                     
                   RFSGSX22SG, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 25) 
                 
                     
                   LTX23SX24LQAEDX254AX26YY, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 26) 
                 
                     
                   FGX27GTKL, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 27) 
                 
                     
                   AAPSVX28X29FPPSX30EX31L, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 28) 
                 
                     
                   AX32X33VCLX34X35X36FYP, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 29) 
                 
                     
                   HX37X38YX39CX40VTHX41G, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 30) 
                 
                     
                   PX42SX43X44X45SX45GX47X48X49TIX50C, 
                 
                     
                   and 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 31) 
                 
                     
                   QX51X52PGX53X54PKLX55IY, 
                 
             
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
               
            
           
         
         wherein X22 is G or K, X23 is I or V, X24 is G or S, X25 is E or V, X26 is D or V, X27 is G, S, or Q, X28 is F or T, X29 is I or L, X30 is D or S, X31 is E or Q, X32 is S or T, X33 is L or V, X34 is I or L, X35 is N or S, X36 is D or N, X37 is K or R, X38 is S or V, X39 is A or S, X40 is E or Q, X41 is E or Q, X42 is A, D, or P, X43 is A, L, or V, X44 is A or S, X45 is G or V, X46 is L or P, X47 is E or Q, X48 is R or S, X49 is A, I, or V, X50 is N or S, X51 is H or Q, X52 is H or K, X53 is K or Q, X54 is A or P, and X55 is L or M. 
       
     
     
         29 . The monoclonal antibody according to  claim 21 , wherein the amino acid sequence contains a region that has a percent sequence identity of at least about 65% up to 100% to 
       
         
           
                 
                 
               
                     
                   (SEQ ID NO: 4) 
                 
                     
                   YMHWYQQKPGQPPKLLIYYASNLESGVPDRFSGS. 
                 
             
                
                
               
            
           
         
       
     
     
         30 . The monoclonal antibody according to  claim 21 , wherein the amino acid sequence contains a region that has 100% sequence identity to a sequence selected from the group consisting of: 
       
         
           
                 
                 
               
                     
                   (SEQ ID NO: 4) 
                 
                     
                   YMHWYQQKPGQPPKLLIYYASNLESGVPDRFSGS, 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 5) 
                 
                     
                   YMHWYQQKPGQPPKLLIYYASNLKAGVPDRFSGS, 
                 
                     
                   and 
                 
                     
                     
                 
                     
                   (SEQ ID NO: 6) 
                 
                     
                   YVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGS. 
                 
             
                
                
                
                
                
                
                
                
                
               
            
           
         
       
     
     
         31 . The monoclonal antibody according to  claim 21 , wherein the amino acid sequence is 
       
         
           
                 
                 
               
                   (SEQ ID NO: 32) 
                     
                 
                   DIVMTQSPDSLAVSLGERATINCRASQSVSTSX56HSYMHWYQQKPGQPPKLLIYYASNLX57 
                     
                 
                     
                 
                   X58GVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQHSWEIPWTFGQGTKLEIKRTVAAPSVF 
                 
                     
                 
                   IFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSST 
                 
                     
                 
                   LTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC, wherein X56 is A or 
                 
                     
                 
                   S, X57 is E or K, X58 is A or S, 
                 
                     
                 
                   (SEQ ID NO: 65) 
                     
                 
                   QSAVTQPPSASGSPGQSVTISCTGTSSDVGAYDYVSWYQQHPGKAPKLMIYEVSKRPSGVPD 
                     
                 
                     
                 
                   RFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGRVDVFGGGTKLTVLGQPKAAPSVTLFPPS 
                 
                     
                 
                   SEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPE 
                 
                     
                 
                   QWKSHRSYSCQVTHEGSTVEKTVAPTECS, 
                 
                   or 
                 
                     
                 
                   (SEQ ID NO: 67) 
                     
                 
                   QSALTQPASVSGSPGQSITISCTRASESVDSYGNSFMHQHHPGKAPKLMIYEVRTSNLESSN 
                     
                 
                     
                 
                   RFSGSKSGNTASLTISGLQAEDEADYYCSSQQSYEDPFTFGSGTKLGQPKAAPSVTLFPPSS 
                 
                     
                 
                   EELQANKATLVCLISDFYPGAVKVAWKADGSPVNTGVETTTPSKQSNNKYAASSYLSLTPEQ 
                 
                     
                 
                   WKSHRSYSCQVTHEGSTVEKTVAPAECS. 
                 
             
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
               
            
           
         
       
     
     
         32 . The monoclonal antibody according to  claim 21 , wherein the VH chain further comprises at least 10, 20, 30, 40, or 50 consecutive amino acid residues of 
       
         
           
                 
                 
               
                   (SEQ ID NO: 23) 
                     
                 
                   TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS 
                     
                 
                     
                 
                   LSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLF 
                 
                     
                 
                   PPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSV 
                 
                     
                 
                   LTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTC 
                 
                     
                 
                   LVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMH 
                 
                     
                 
                   EALHNHYTQKSLSLSPGK at its C-terminus. 
                 
             
                
                
                
                
                
                
                
                
                
                
                
                
               
            
           
         
       
     
     
         33 . The monoclonal antibody according to  claim 24 , wherein the VH chain further comprises 
       
         
           
                 
                 
               
                   (SEQ ID NO: 23) 
                     
                 
                   TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS 
                     
                 
                     
                 
                   LSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLF 
                 
                     
                 
                   PPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSV 
                 
                     
                 
                   LTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTC 
                 
                     
                 
                   LVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMH 
                 
                     
                 
                   EALHNHYTQKSLSLSPGK at its C-terminus. 
                 
             
                
                
                
                
                
                
                
                
                
                
                
                
               
            
           
         
       
     
     
         34 . The monoclonal antibody according to  claim 21 , wherein the monoclonal antibody binds to human IgE with a binding affinity of about 5×10 −5  to about 7×10 −8  M Kd as measured by the Biacore method. 
     
     
         35 . A composition comprising one or more monoclonal antibodies according to  claim 21 . 
     
     
         36 . A method of treating a subject for a food allergy, asthma, allergic rhinitis, atopic dermatitis, urticaria, angioedema, or anaphylactic hypersensitivity, which comprises administering to the subject one or more monoclonal antibodies according to  claim 21  or a composition comprising the one or more monoclonal antibodies. 
     
     
         37 . The method for treating a subject according to  claim 36 , which comprises determining the binding affinity to human IgE of the one or more monoclonal antibodies using the Biacore method, and administering the one or more monoclonal antibodies which have a binding affinity of about 5×10 −5  to about 7×10 −8  M Kd to human IgE. 
     
     
         38 . A method for treating or inhibiting an allergic reaction in a subject, which comprises administering to the subject one or more monoclonal antibodies according to  claim 21  or a composition comprising the one or more monoclonal antibodies. 
     
     
         39 . The method for treating or inhibiting an allergic reaction in a subject according to  claim 38 , which comprises determining the binding affinity to human IgE of the one or more monoclonal antibodies using the Biacore method, and administering the one or more monoclonal antibodies which have a binding affinity of about 5×10 −5  to about 7×10 −8  M Kd to human IgE.

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