US2018305347A1PendingUtilityA1
Methods and compositions useful in treating cancer and reducing wnt mediated effects in a cell
Assignee: STEMSYNERGY THERAPEUTICS INCPriority: Mar 2, 2009Filed: Nov 29, 2017Published: Oct 25, 2018
Est. expiryMar 2, 2029(~2.6 yrs left)· nominal 20-yr term from priority
Inventors:Darren Orton
A61P 35/00C07D 401/12A61K 31/428C07D 213/75C07D 417/04C07D 403/12C07C 311/46C07D 277/44C07D 215/58C07D 417/14A61K 31/4436A61K 31/4427C07D 417/12
60
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Claims
Abstract
Provided herein are novel compounds, pharmaceutical compositions for use, inter alia, in methods of reducing Wnt-mediated effects and treating cancer.
Claims
exact text as granted — not AI-modifiedWhat is claimed is:
1 . A method of reducing a Wnt-mediated effect on a cell, said method comprising contacting said cell with an effective amount of a compound having the formula:
wherein,
R 1 is substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 2 is hydrogen, halogen, —CN, —CF 3 , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 3 is halogen, —CN, —CF 3 , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl, wherein R 2 and R 3 are optionally joined together to form a substituted or unsubstituted heterocycloalkyl or substituted or unsubstituted heteroaryl;
R 4 is independently halogen, —CN, —CF 3 , —NR 4A —C(O)R 4B , —NR 4A —C(O)—OR 4B , —C(O)NR 4A R 4B , —NR 4A S(O) 2 R 4B , —S(O) 2 N(R 4A )(R 4B ), —SR 4A , —S(O)R 4B , —S(O) 2 R 4B , —NR 4A R 4B , —OR 4A , —C(O)R 4B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 4A and R 4B are independently hydrogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
w is an integer from 0 to 4; and
L 1 is —NH—C(O)— or —C(O)—NH—.
2 . The method of claim 1 , wherein said Wnt-mediated effect is an increase in degradation of Pygopus, an increase in degradation of non-oncogenic beta-Catenin, a decrease in degradation of Axin, a decrease in activity of Myc, a decrease in activity of CD44, a decrease in activity of Axin2, a decrease in activity of Bcl-9, or a decrease in activity of cyclin D.
3 . The method of claim 1 , wherein R 1 is a substituted or unsubstituted heteroaryl or a substituted or unsubstituted phenyl.
4 . The method of claim 1 , wherein R 1 is a substituted or unsubstituted thiazolyl, substituted or unsubstituted benzothiazolyl, substituted or unsubstituted 4,5-dihydro-1H-benzoindazolyl or substituted or unsubstituted pyrazolyl.
5 . The method of claim 1 , wherein R 2 is hydrogen or unsubstituted alkyl.
6 . The method of claim 5 , wherein R 3 is substituted or unsubstituted phenyl.
7 . The method of claim 1 , wherein R 2 and R 3 are joined together to form a substituted or unsubstituted heteroaryl.
8 . The method of claim 7 , wherein R 2 and R 3 are joined together to form a substituted or unsubstituted indolin-1-yl or a substituted or unsubstituted tetrahydroquinolinyl.
9 . A method of treating cancer in a subject in need thereof, said method comprising administering to said subject an effective amount of a compound, or pharmaceutically acceptable salt thereof, having the formula:
wherein,
R 1 is substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 2 is hydrogen, halogen, —CN, —CF 3 , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 3 is halogen, —CN, —CF 3 , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl, wherein R 2 and R 3 are optionally joined together to form a substituted or unsubstituted heterocycloalkyl or substituted or unsubstituted heteroaryl;
R 4 is independently halogen, —CN, —CF 3 , —NR 4A —C(O)R 4B , —NR 4A —C(O)—OR 4B , —C(O)NR 4A R 4B , —NR 4A S(O) 2 R 4B , —S(O) 2 N(R 4A )(R 4B ), —SR 4A , —S(O)R 4B , —S(O) 2 R 4B , —NR 4A R 4B , —OR 4A , —C(O)R 4B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 4A and R 4B are independently hydrogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
w is an integer from 0 to 4; and
L 1 is —NH—C(O)— or —C(O)—NH—.
10 . The method of claim 9 , wherein said cancer is colon cancer, breast cancer, gastric cancer, brain cancer, head and neck cancer, liver cancer, lung cancer, lymphoma, melanoma, pancreatic cancer or prostate cancer.
11 . A pharmaceutical composition comprising a pharmaceutically acceptable excipient and a compound having the formula:
wherein,
R 1 is substituted or unsubstituted aryl or substituted or unsubstituted heteroaryl;
L 1 is NH—C(O)— or C(O)—NH—;
R 2 is hydrogen, halogen, —CN, —CF 3 , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 4 is independently halogen, —CN, —CF 3 , —NR 4A —C(O)R 4B , —NR 4A —C(O)—OR 4B , —C(O)NR 4A R 4B , —NR 4A S(O) 2 R 4B , —S(O) 2 N(R 4A )(R 4B ), —SR 4A , —S(O)R 4B , —S(O) 2 R 4B , —NR 4A R 4B , —OR 4A , —C(O)R 4B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 5 is hydrogen, halogen, —CN, —CF 3 , —NR 5A —C(O)R 5B , —NR 5A —C(O)—OR 5B , —C(O)NR 5A R 5B , —NR 5A S(O) 2 R 5B , —S(O) 2 N(R 5A )(R 5B ), —SR 5A , —S(O)R 5B , —S(O) 2 R 5B , —NR 5A R 5B , —OR 5A , —C(O)R 5B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 6 is independently halogen, —CN, —CF 3 , —NR 6A —C(O)R 6B , —NR 6A —C(O)—OR 6B , —C(O)NR 6A R 6B , —NR 6A S(O) 2 R 6B , —S(O) 2 N(R 6A )(R 6B ), —SR 6A , —S(O)R 6B , —S(O) 2 R 6B , —NR 6A R 6B , —OR 6A , —C(O)R 6B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 4A , R 4B , R 5A , R 5B , R 6A and R 6B are independently hydrogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
z is an integer from 0 to 4; and
w is an integer from 0 to 4.
12 . The pharmaceutical composition of claim 11 , wherein said compound has the formula:
13 . The pharmaceutical composition of claim 11 , wherein said compound has the formula:
14 . The pharmaceutical composition of claim 11 , wherein R 2 and R 5 are not joined together to form a substituted or unsubstituted heterocycloalkyl or substituted or unsubstituted heteroaryl.
15 . The pharmaceutical composition of claim 11 , wherein said compound has the formula:
wherein,
R 7 is hydrogen, halogen, —CN, —CF 3 , —NR 7A —C(O)R 7B , —NR 7A —C(O)—OR 7B , —C(O)NR 7A R 7B , —NR 7A S(O) 2 R 7B , —S(O) 2 N(R 7A )(R 7B ), —SR 7A , —S(O)R 7B , —S(O) 2 R 7B , —NR 7A R 7B , —OR 7A , —C(O)R 7B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 8 is hydrogen, halogen, CN, —NR 8A —C(O)R 8B , —NR 8A —C(O)—OR 8B , —C(O)NR 8A R 8B , —NR 8A S(O) 2 R 8B , —S(O) 2 N(R 8A )(R 8B ), —SR 8A , —S(O)R 8B , —S(O) 2 R 8B , —NR 8A R 8B , —OR 8A , —C(O)R 8B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl, wherein R 7 and R 8 are optionally joined together to form a substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 7A , R 7B , R 8A and R 8B are independently hydrogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl.
16 . The pharmaceutical composition of claim 15 , wherein said compound has the formula:
17 . The pharmaceutical composition of claim 15 , wherein said compound has the formula:
18 . The pharmaceutical composition of claim 15 , wherein R 2 and R 5 are not joined together to form a substituted or unsubstituted heterocycloalkyl or substituted or unsubstituted heteroaryl.
19 . The pharmaceutical composition of claim 15 , wherein said compound has the formula:
wherein,
X 1 and X 2 are independently carbon or nitrogen;
R 9 is independently halogen, —CN, —CF 3 , —NR 9A —C(O)R 9B , —NR 9A —C(O)—OR 9B , —C(O)NR 9A R 9B , —NR 9A S(O) 2 R 9B , —S(O) 2 N(R 9A )(R 9B ), —SR 9A , —S(O)R 9B , —S(O) 2 R 9B , —NR 9A R 9B , —OR 9A , —C(O)R 9B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl; and
R 9A and R 9B are independently hydrogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl; and
u is an integer from 0 to 5.
20 . The pharmaceutical composition of claim 19 , wherein said compound has the formula:
21 . The pharmaceutical composition of claim 19 , wherein said compound has the formula:
22 . The pharmaceutical composition of claim 19 , wherein R 2 and R 5 are not joined together to form a substituted or unsubstituted heterocycloalkyl or substituted or unsubstituted heteroaryl.
23 . The pharmaceutical composition of claim 11 , wherein said compound has the formula:
wherein,
R 10 is hydrogen, halogen, —CN, —CF 3 , —NR 10A —C(O)R 10B , —NR 10A —C(O)—OR 10B , —C(O)NR 10A R 10B , —NR 10A S(O) 2 R 10B , —S(O) 2 N(R 10A )(R 10B ), —SR 10A , —S(O)R 10B , —S(O) 2 R 10B , —NR 10A R 10B , —OR 10A , —C(O)R 10B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 11 is hydrogen, halogen, —CN, —CF 3 , —NR 11A —C(O)R 11B , —NR 11A C(O)—OR 11B , —C(O)NR 11A R 11B , —NR 11A S(O) 2 R 11B , —S(O) 2 N(R 11A )(R 11B ), —SR 11A , —S(O)R 11B , —S(O) 2 R 11B , —NR 11A R 11B , —OR 11A , —C(O)R 11B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl, wherein R 10 and R 11 are optionally joined together to form a substituted or unsubstituted heterocycloalkyl or substituted or unsubstituted heteroaryl;
R 12 is hydrogen, halogen, —CN, —CF 3 , —NR 12A —C(O)R 12B , —NR 12A —C(O)—OR 12B , —C(O)NR 12A R 2B , —NR 12A S(O) 2 R 12B , —S(O) 2 N(R 12A )(R 12B ), —SR 12A , —S(O)R 12B , —S(O) 2 R 12B , —NR 12A R 12B , —OR 12A , —C(O)R 12B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl; and
R 10A , R 10B , R 11A , R 11B , R 12A and R 12B are independently hydrogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl.
24 . The pharmaceutical composition of claim 23 , wherein said compound has the formula:
25 . The pharmaceutical composition of claim 23 , wherein said compound has the formula:
26 . The pharmaceutical composition of claim 23 , wherein R 2 and R 5 are not joined together to form a substituted or unsubstituted heterocycloalkyl or substituted or unsubstituted heteroaryl.
27 . The pharmaceutical composition of claim 11 , wherein said compound has the formula:
wherein,
R 13 is independently halogen, —CN, —CF 3 , —NR 13A —C(O)R 13B , —NR 13A —C(O)—OR 13B , —C(O)NR 13A R 13B , —NR 13A S(O) 2 R 13B , —S(O) 2 N(R 13A )(R 13B ), —SR 13A , —S(O)R 13B , —S(O) 2 R 13B , —NR 13A R 13B , —OR 13A , —C(O)R 13B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 13A and R 13B are independently hydrogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl; and
m is an integer from 0 to 5.
28 . The pharmaceutical composition of claim 27 , wherein said compound has the formula:
29 . The pharmaceutical composition of claim 27 , wherein said compound has the formula:
30 . The pharmaceutical composition of claim 27 , wherein R 2 and R 5 are not joined together to form a substituted or unsubstituted heterocycloalkyl or substituted or unsubstituted heteroaryl.
31 . A compound having the formula:
wherein,
L 1 is —NH—C(O)— or —C(O)—NH—;
R 2 is hydrogen, halogen, —CN, —CF 3 , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 4 is independently halogen, —CN, —CF 3 , —NR 4A —C(O)R 4B , —NR 4A —C(O)—OR 4B , —C(O)NR 4A R 4B , —NR 4A S(O) 2 R 4B , —S(O) 2 N(R 4A )(R 4B ), —SR 4A , —S(O)R 4B , —S(O) 2 R 4B , —NR 4A R 4B , —OR 4A , —C(O)R 4B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 5 is hydrogen, halogen, —CN, —CF 3 , —NR 5A —C(O)R 5B , —NR 5A —C(O)—OR 5B , —C(O)NR 5A R 5B , —NR 5A S(O) 2 R 5B , —S(O) 2 N(R 5A )(R 5B ), —SR 5A , —S(O)R 5B , —S(O) 2 R 5B , —NR 5A R 5B , —OR 5A , —C(O)R 5B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl, wherein R 2 and R 5 are optionally joined together to form a substituted or unsubstituted heterocycloalkyl or substituted or unsubstituted heteroaryl;
R 6 is independently halogen, —CN, —CF 3 , —NR 6A —C(O)R 6B , —NR 6A —C(O)—OR 6B , —C(O)NR 6A R 6B , —NR 6A S(O) 2 R 6B , —S(O) 2 N(R 6A )(R 6B ), —SR 6A , —S(O)R 6B , —S(O) 2 R 6B , —NR 6A R 6B , —OR 6A , —C(O)R 6B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 8 is hydrogen, halogen, CN, —NR 8A —C(O)R 8B , —NR 8A —C(O)—OR 8B , —C(O)NR 8A R 8B , —NR 8A S(O) 2 R 8B , —S(O) 2 N(R 8A )(R 8B ), —SR 8A , —S(O)R 8B , —S(O) 2 R 8B , —NR 8A R 8B , —OR 8A , —C(O)R 8B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 9 is independently halogen, —CN, —CF 3 , —NR 9A —C(O)R 9B , —NR 9A —C(O)—OR 9B , —C(O)NR 9A R 9B , —NR 9A S(O) 2 R 9B , —S(O) 2 N(R 9A )(R 9B ), —SR 9A , —S(O)R 9B , —S(O) 2 R 9B , —NR 9A R 9B , —OR 9A , —C(O)R 9B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 4A , R 4B , R 5A , R 5B , R 6A , R 6B , R 8A , R 8B , R 9A and R 9B are independently hydrogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
z is an integer from 0 to 4;
w is an integer from 0 to 4; and
u is an integer from 0 to 5.
32 . The compound of claim 31 , wherein said compound has the formula
33 . A compound having the formula:
wherein,
L 1 is —NH—C(O)— or —C(O)—NH—;
R 4 is independently halogen, —CN, —CF 3 , —NR 4A —C(O)R 4B , —NR 4A —C(O)—OR 4B , —C(O)NR 4A R 4B , —NR 4A S(O) 2 R 4B , —S(O) 2 N(R 4A )(R 4B ), —SR 4A , —S(O)R 4B , —S(O) 2 R 4B , —NR 4A R 4B , —OR 4A , —C(O)R 4B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 6 is independently halogen, —CN, —CF 3 , —NR 6A —C(O)R 6B , —NR 6A —C(O)—OR 6B , —C(O)NR 6A R 6B , —NR 6A S(O) 2 R 6B , —S(O) 2 N(R 6A )(R 6B ), —SR 6A , —S(O)R 6B , —S(O) 2 R 6B , —NR 6A R 6B , —OR 6A , —C(O)R 6B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 8 is hydrogen, halogen, CN, —NR 8A —C(O)R 8B , —NR 8A —C(O)—OR 8B , —C(O)NR 8A R 8B , —NR 8A S(O) 2 R 8B , —S(O) 2 N(R 8A )(R 8B ), —SR 8A , —S(O)R 8B , —S(O) 2 R 8B , —NR 8A R 8B , —OR 8A , —C(O)R 8B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 9 is independently halogen, —CN, —CF 3 , —NR 9A —C(O)R 9B , —NR 9A —C(O)—OR 9B , —C(O)NR 9A R 9B , —NR 9A S(O) 2 R 9B , —S(O) 2 N(R 9A )(R 9B ), —SR 9A , —S(O)R 9B , —S(O) 2 R 9B , —NR 9A R 9B , —OR 9A , —C(O)R 9B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 4A , R 4B , R 6A , R 6B , R 8A , R 8B , R 9A and R 9B are independently hydrogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
z is an integer from 0 to 4; and
w is an integer from 0 to 4.
u is an integer from 0 to 5.
34 . A compound having the formula:
wherein,
L 1 is —NH—C(O)— or —C(O)—NH—;
R 2 is hydrogen, halogen, —CN, —CF 3 , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 4 is independently halogen, —CN, —CF 3 , —NR 4A —C(O)R 4B , —NR 4A —C(O)—OR 4B , —C(O)NR 4A R 4B , —NR 4A S(O) 2 R 4B , —S(O) 2 N(R 4A )(R 4B ), —SR 4A , —S(O)R 4B , —S(O) 2 R 4B , —NR 4A R 4B , —OR 4A , —C(O)R 4B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 5 is hydrogen, halogen, —CN, —CF 3 , —NR 5A —C(O)R 5B , —NR 5A —C(O)—OR 5B , —C(O)NR 5A R 5B , —NR 5A S(O) 2 R 5B , —S(O) 2 N(R 5A )(R 5B ), —SR 5A , —S(O)R 5B , —S(O) 2 R 5B , —NR 5A R 5B , —OR 5A , —C(O)R 5B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 6 is independently halogen, —CN, —CF 3 , —NR 6A —C(O)R 6B , —NR 6A —C(O)—OR 6B , —C(O)NR 6A R 6B , —NR 6A S(O) 2 R 6B , —S(O) 2 N(R 6A )(R 6B ), —SR 6A , —S(O)R 6B , —S(O) 2 R 6B , —NR 6A R 6B , —OR 6A , —C(O)R 6B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 8 is hydrogen, halogen, CN, —NR 8A —C(O)R 8B , —NR 8A —C(O)—OR 8B , —C(O)NR 8A R 8B , —NR 8A S(O) 2 R 8B , —S(O) 2 N(R 8A )(R 8B ), —SR 8A , —S(O)R 8B , —S(O) 2 R 8B , —NR 8A R 8B , —OR 8A , —C(O)R 8B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 9 is independently halogen, —CN, —CF 3 , —NR 9A —C(O)R 9B , —NR 9A —C(O)—OR 9B , —C(O)NR 9A R 9B , —NR 9A S(O) 2 R 9B , —S(O) 2 N(R 9A )(R 9B ), —SR 9A , —S(O)R 9B , —S(O) 2 R 9B , —NR 9A R 9B , —OR 9A , —C(O)R 9B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 4A , R 4B , R 5A , R 5B , R 6A , R 6B , R 8A , R 8B , R 9A and R 9B are independently hydrogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
z is an integer from 0 to 4; and
w is an integer from 0 to 4.
u is an integer from 0 to 5.
35 . A compound having the formula:
wherein,
L 1 is —NH—C(O)— or —C(O)—NH—;
R 4 is independently halogen, —CN, —CF 3 , —NR 4A —C(O)R 4B , —NR 4A —C(O)—OR 4B , —C(O)NR 4A R 4B , —NR 4A S(O) 2 R 4B , —S(O) 2 N(R 4A )(R 4B ), —SR 4A , —S(O)R 4B , —S(O) 2 R 4B , —NR 4A R 4B , —OR 4A , —C(O)R 4B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 6 is independently halogen, —CN, —CF 3 , —NR 6A —C(O)R 6B , —NR 6A —C(O)—OR 6B , —C(O)NR 6A R 6B , —NR 6A S(O) 2 R 6B , —S(O) 2 N(R 6A )(R 6B ), —SR 6A , —S(O)R 6B , —S(O) 2 R 6B , —NR 6A R 6B , —OR 6A , —C(O)R 6B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 13 is independently halogen, —CN, —CF 3 , —NR 13A —C(O)R 13B , —NR 13A —C(O)—OR 13B , —C(O)NR 13A R 13B , —NR 13A S(O) 2 R 13B , —S(O) 2 N(R 13A )(R 13B ), —SR 13A , —S(O)R 13B , —S(O) 2 R 13B , —NR 13A R 13B , —OR 13A , —C(O)R 13B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 4A , R 4B , R 6A , R 6B , R 13A and R 13B are independently hydrogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl; and
m is an integer from 0 to 5.
z is an integer from 0 to 4; and
w is an integer from 0 to 4.
36 . A compound having the formula:
wherein,
R 2 is hydrogen, halogen, —CN, —CF 3 , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 4 is independently halogen, —CN, —CF 3 , —NR 4A —C(O)R 4B , —NR 4A —C(O)—OR 4B , —C(O)NR 4A R 4B , —NR 4A S(O) 2 R 4B , —S(O) 2 N(R 4A )(R 4B ), —SR 4A , —S(O)R 4B , —S(O) 2 R 4B , —NR 4A R 4B , —OR 4A , —C(O)R 4B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 5 is hydrogen, halogen, —CN, —CF 3 , —NR 5A —C(O)R 5B , —NR 5A —C(O)—OR 5B , —C(O)NR 5A R 5B , —NR 5A S(O) 2 R 5B , —S(O) 2 N(R 5A )(R 5B ), —SR 5A , —S(O)R 5B , —S(O) 2 R 5B , —NR 5A R 5B , —OR 5A , —C(O)R 5B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl, wherein R 2 and R 5 are optionally joined together to form a substituted or unsubstituted heterocycloalkyl or substituted or unsubstituted heteroaryl;
R 6 is independently halogen, —CN, —CF 3 , —NR 6A —C(O)R 6B , —NR 6A —C(O)—OR 6B , —C(O)NR 6A R 6B , —NR 6A S(O) 2 R 6B , —S(O) 2 N(R 6A )(R 6B ), —SR 6A , —S(O)R 6B , —S(O) 2 R 6B , —NR 6A R 6B , —OR 6A , —C(O)R 6B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 10 is hydrogen, halogen, —CN, —CF 3 , —NR 10A —C(O)R 10B , —NR 10A —C(O)—OR 10B , —C(O)NR 10A R 10B , —NR 10A S(O) 2 R 10B , —S(O) 2 N(R 10A )(R 10B ), —SR 10A , —S(O)R 10B , —S(O) 2 R 10B , —NR 10A R 10B , —OR 10A , —C(O)R 10B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 11 is hydrogen, halogen, —CN, —CF 3 , —NR 11A —C(O)R 11B , —NR 11A —C(O)—OR 11B , —C(O)NR 11A R 11B , —NR 11A S(O) 2 R 11B , —S(O) 2 N(R 11A )(R 11B ), —SR 11A , —S(O)R 11B , —S(O) 2 R 11B , —NR 11A R 11B , —OR 11A , —C(O)R 11B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 12 is hydrogen, halogen, —CN, —CF 3 , —NR 12A —C(O)R 12B , —NR 12A —C(O)—OR 12B , —C(O)NR 12A R 12B , —NR 12A S(O) 2 R 12B , —S(O) 2 N(R 12A )(R 12B ), —SR 12A , —S(O)R 12B , —S(O) 2 R 12B , —NR 12A R 12B , —OR 12A , —C(O)R 12B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 4A , R 4B , R 5A , R 5B , R 6A , R 6B , R 10A , R 10B , R 11A , R 11B , R 12A and R 12B are independently hydrogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
z is an integer from 0 to 4; and
w is an integer from 0 to 4.
37 . The compound of claim 36 , wherein said compound has the formula:
wherein,
R 14 is independently halogen, —CN, —CF 3 , —NR 14A —C(O)R 14B , —NR 14A —C(O)—OR 14B , —C(O)NR 14A R 14B , —NR 14A S(O) 2 R 14B , —S(O) 2 N(R 14A )(R 14B ), —SR 14A , —S(O)R 14B , —S(O) 2 R 14B , —NR 14A R 14B , —OR 14A , —C(O)R 14B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl; and
R 14A and R 14B are independently hydrogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl; and
q is an integer from 0 to 5.
38 . The compound of claim 37 , wherein said compound has the formula:
39 . A compound having the formula:
wherein,
L 1 is NH—C(O)— or C(O)—NH—;
R 2 is hydrogen, halogen, —CN, —CF 3 , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 4 is independently halogen, —CN, —CF 3 , —NR 4A —C(O)R 4B , —NR 4A —C(O)—OR 4B , —C(O)NR 4A R 4B , —NR 4A S(O) 2 R 4B , —S(O) 2 N(R 4A )(R 4B ), —SR 4A , —S(O)R 4B , —S(O) 2 R 4B , —NR 4A R 4B , —OR 4A , —C(O)R 4B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 5 is hydrogen, halogen, —CN, —CF 3 , —NR 5A —C(O)R 5B , —NR 5A —C(O)—OR 5B , —C(O)NR 5A R 5B , —NR 5A S(O) 2 R 5B , —S(O) 2 N(R 5A )(R 5B ), —SR 5A , —S(O)R 5B , —S(O) 2 R 5B , —NR 5A R 5B , —OR 5A , —C(O)R 5B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 6 is independently halogen, —CN, —CF 3 , —NR 6A —C(O)R 6B , —NR 6A —C(O)—OR 6B , —C(O)NR 6A R 6B , —NR 6A S(O) 2 R 6B , —S(O) 2 N(R 6A )(R 6B ), —SR 6A , —S(O)R 6B , —S(O) 2 R 6B , —NR 6A R 6B , —OR 6A , —C(O)R 6B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 15 is independently halogen, —CN, —CF 3 , —NR 15A —C(O)R 15B , —NR 15A —C(O)—OR 15B , —C(O)NR 15A R 15B , —NR 15A S(O) 2 R 15B , —S(O) 2 N(R 15A )(R 15B ), —SR 15A , —S(O)R 15B , —S(O) 2 R 15B , —NR 15A R 15B , —OR 15A , —C(O)R 15B , substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
R 4A , R 4B , R 5A , R 5B , R 6A , R 6B , R 15A and R 15B are independently hydrogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, unsubstituted cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;
z is an integer from 0 to 4;
w is an integer from 0 to 4; and
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