US2016068559A1PendingUtilityA1

Modulators of Histone Methyltransferase, and Methods of Use Thereof

Assignee: EPIZYME INCPriority: Dec 3, 2010Filed: Apr 7, 2015Published: Mar 10, 2016
Est. expiryDec 3, 2030(~4.3 yrs left)· nominal 20-yr term from priority
C07H 19/167A61P 35/00C07H 19/16C07D 473/34
47
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Claims

Abstract

Disclosed are compounds, pharmaceutical compositions containing the compounds, and the uses of the compounds and compositions as modulators of histone methyltransferases, and for treating diseases influenced by modulation of histone methyltransferase activity.

Claims

exact text as granted — not AI-modified
1 - 99 . (canceled) 
     
     
         100 . A compound of formula II: 
       
         
           
           
               
               
           
         
       
       or a pharmaceutically acceptable salt, hydrate, enantiomer or stereoisomer thereof, wherein independently for each occurrence,
 X is 
 
       
         
           
           
               
               
           
         
         R 1  is hydrogen, alkyl, cycloalkyl, alkylcycloalkyl, alkylaryl, haloalkyl, formyl, heterocyclyl, heterocyclylalkyl, 
       
       
         
           
           
               
               
           
         
       
       or (C 2 -C 4 )alkyl substituted with 
       
         
           
           
               
               
           
         
         R 10  is hydrogen or alkyl; 
         R 11a  is hydrogen, alkyl, or alkyl-cycloalkyl; 
         R 11b  is hydrogen or alkyl; or taken together with R 11a  and the nitrogen to which it is attached forms a 4- to 8-membered heterocyclyl comprising 0 or 1 additional heteroatoms; 
         R 13  is hydrogen, alkyl, aryl, heteroaryl, aralkyl, heteroaralkyl or silyl; 
         R 14  is hydrogen, alkyl, aryl, heteroaryl, aralkyl or heteroaralkyl; 
         R 15  is alkyl, cycloalkyl or cycloalkylalkyl; 
         R 20  is hydrogen, alkyl, cycloalkyl or cycloalkylalkyl; 
         A is 
       
       
         
           
           
               
               
           
         
         R 2  is 
       
       
         
           
           
               
               
           
         
         Y is —NH—, —N(alkyl)-, —O—, or —CR 6   2 —; 
         R 22a  is aryl, heteroaryl, aralkyl, heteroaralkyl, fused bicyclyl, biaryl, aryloxyaryl, heteroaryloxyaryl, aryloxyheteroaryl or heteroaryloxyheteroaryl, each of which is unsubstituted or substituted; 
         R 22b  is hydrogen or alkyl; 
         R 24  is hydrogen or alkyl; 
         R 25a , R 25b , R 25c , R 25d  are each independently -M 2 -T 2 , in which M 2  is a bond, SO 2 , SO, S, CO, CO 2 , O, O—C 1 -C 4  alkyl linker, C 1 -C 4  alkyl linker, NH, or N(R t ), R t  being C 1 -C 6  alkyl, and T 2  is H, halo, or R S4 , R S4  being C 1 -C 6  alkyl, C 2 -C 6  alkenyl, C 2 -C 6  alkynyl, C 3 -C 8  cycloalkyl, C 6 -C 10  aryl, 4 to 8-membered heterocycloalkyl, or 5 to 10-membered heteroaryl, and each of O—C 1 -C 4  alkyl linker, C 1 -C 4  alkyl linker, R t , and R S4  being optionally substituted with one or more substituents selected from the group consisting of halo, hydroxyl, carboxyl, cyano, C 1 -C 6  alkyl, C 2 -C 6  alkenyl, C 2 -C 6  alkynyl, C 1 -C 6  alkoxyl, amino, mono-C 1 -C 6  alkylamino, di-C 1 -C 6  alkylamino, C 3 -C 8  cycloalkyl, C 6 -C 10  aryl, 4 to 6-membered heterocycloalkyl, and 5 to 6-membered heteroaryl; 
         Z is hydrogen or 
       
       
         
           
           
               
               
           
         
         R 5a  is hydrogen, alkyl, alkenyl, alkynyl, carbocyclyl, heterocyclyl, aryl, heteroaryl, biaryl, alkenylalkyl, alkynylalkyl, carbocyclylalkyl, heterocyclylalkyl, aralkyl, heteroaralkyl, alkylcarbonylaminoalkyl, arylcarbonylaminoalkyl, aralkylcarbonylaminoalkyl, arylsulfonylaminoalkyl, alkylthioalkyl, aralkylthioalkyl or heteroaralkylthioalkyl; or alkyl substituted with 1, 2 or 3 substituents independently selected from the group consisting of hydroxy, halo, carboxy, alkyoxy, aryloxy, aralkyloxy, nitro, amino, amido, aryl and heteroaryl; 
         R 5b  is hydrogen, alkyl, alkenyl, alkynyl, carbocyclyl, heterocyclyl, aryl, heteroaryl, biaryl, alkenylalkyl, alkynylalkyl, carbocyclylalkyl, heterocyclylalkyl, aralkyl, heteroaralkyl, alkylcarbonylaminoalkyl, arylcarbonylaminoalkyl, aralkylcarbonylaminoalkyl, arylsulfonylaminoalkyl, alkylthioalkyl, aralkylthioalkyl or heteroaralkylthioalkyl; or alkyl substituted with 1, 2 or 3 substituents independently selected from the group consisting of hydroxy, halo, carboxy, alkyoxy, aryloxy, aralkyloxy, nitro, amino, amido, aryl and heteroaryl; or taken together with R 5a  and the nitrogen to which it is attached forms a 4- to 8-membered heterocyclyl comprising 0 or 1 additional heteroatoms; 
         each R 6  independently is hydrogen, alkyl or halo; or two geminal R 6  taken together are ethylene, propylene or butylene; 
         R 7a  is hydrogen, lower alkyl, lower haloalkyl, cyano, halo, lower alkoxy, or C 3 -C 5  cycloalkyl, optionally substituted with 1, 2 or 3 substituents independently selected from the group consisting of cyano, lower alkoxy and halo; and 
         R 7b  is hydrogen, lower alkyl, lower haloalkyl, cyano, halo, lower alkoxy, or C 3 -C 5  cycloalkyl, optionally substituted with 1, 2 or 3 substituents independently selected from the group consisting of cyano, lower alkoxy and halo. 
       
     
     
         101 . The compound of  claim 100 , wherein X is 
       
         
           
           
               
               
           
         
       
     
     
         102 . The compound of  claim 100 , wherein X is 
       
         
           
           
               
               
           
         
       
     
     
         103 . A compound of formula II: 
       
         
           
           
               
               
           
         
       
       or a pharmaceutically acceptable salt, hydrate, enantiomer or stereoisomer thereof, wherein independently for each occurrence,
 X is 
 
       
         
           
           
               
               
           
         
         R 1  is hydrogen, alkyl, cycloalkyl, alkylcycloalkyl, alkylaryl, haloalkyl, formyl, heterocyclyl, heterocyclylalkyl, 
       
       
         
           
           
               
               
           
         
       
       or (C 2 -C 4 )alkyl substituted with 
       
         
           
           
               
               
           
         
       
       except that when X is 
       
         
           
           
               
               
           
         
       
       R 1  is not 
       
         
           
           
               
               
           
         
         R 10  is hydrogen or alkyl; 
         R 11a  is hydrogen, alkyl, or alkyl-cycloalkyl; 
         R 11b  is hydrogen or alkyl; or taken together with R 11a  and the nitrogen to which it is attached forms a 4- to 8-membered heterocyclyl comprising 0 or 1 additional heteroatoms; 
         R 13  is hydrogen, alkyl, aryl, heteroaryl, aralkyl, heteroaralkyl or silyl; 
         R 14  is hydrogen, alkyl, aryl, heteroaryl, aralkyl or heteroaralkyl; 
         R 15  is alkyl, cycloalkyl or cycloalkylalkyl; 
         R 20  is hydrogen, alkyl, cycloalkyl or cycloalkylalkyl; 
         A is 
       
       
         
           
           
               
               
           
         
         R 2  is 
       
       
         
           
           
               
               
           
         
         Y is —NH—, —N(alkyl)-, —O—, or —CR 6   2 —; 
         R 22a  is aryl or aralkyl, each of which is unsubstituted or substituted; 
         R 22b  is hydrogen or alkyl; 
         R 24  is hydrogen or alkyl; 
         R 25a , R 25b , R 25c , R 25d  are each independently -M 2 -T 2 , in which M 2  is a bond, SO 2 , SO, S, CO, CO 2 , O, O—C 1 -C 4  alkyl linker, C 1 -C 4  alkyl linker, NH, or N(R t ), R t  being C 1 -C 6  alkyl, and T 2  is H, halo, or R S4 , R S4  being C 1 -C 6  alkyl, C 2 -C 6  alkenyl, C 2 -C 6  alkynyl, C 3 -C 8  cycloalkyl, C 6 -C 10  aryl, 4 to 8-membered heterocycloalkyl, or 5 to 10-membered heteroaryl, and each of O—C 1 -C 4  alkyl linker, C 1 -C 4  alkyl linker, R t , and R S4  being optionally substituted with one or more substituents selected from the group consisting of halo, hydroxyl, carboxyl, cyano, C 1 -C 6  alkyl, C 2 -C 6  alkenyl, C 2 -C 6  alkynyl, C 1 -C 6  alkoxyl, amino, mono-C 1 -C 6  alkylamino, di-C 1 -C 6  alkylamino, C 3 -C 8  cycloalkyl, C 6 -C 10  aryl, 4 to 6-membered heterocycloalkyl, and 5 to 6-membered heteroaryl; 
         Z is hydrogen or 
       
       
         
           
           
               
               
           
         
         R 5a  is hydrogen, alkyl, alkenyl, alkynyl, carbocyclyl, heterocyclyl, aryl, heteroaryl, biaryl, alkenylalkyl, alkynylalkyl, carbocyclylalkyl, heterocyclylalkyl, aralkyl, heteroaralkyl, alkylcarbonylaminoalkyl, arylcarbonylaminoalkyl, aralkylcarbonylaminoalkyl, arylsulfonylaminoalkyl, alkylthioalkyl, aralkylthioalkyl or heteroaralkylthioalkyl; or alkyl substituted with 1, 2 or 3 substituents independently selected from the group consisting of hydroxy, halo, carboxy, alkyoxy, aryloxy, aralkyloxy, nitro, amino, amido, aryl and heteroaryl; 
         R 5b  is hydrogen, alkyl, alkenyl, alkynyl, carbocyclyl, heterocyclyl, aryl, heteroaryl, biaryl, alkenylalkyl, alkynylalkyl, carbocyclylalkyl, heterocyclylalkyl, aralkyl, heteroaralkyl, alkylcarbonylaminoalkyl, arylcarbonylaminoalkyl, aralkylcarbonylaminoalkyl, arylsulfonylaminoalkyl, alkylthioalkyl, aralkylthioalkyl or heteroaralkylthioalkyl; or alkyl substituted with 1, 2 or 3 substituents independently selected from the group consisting of hydroxy, halo, carboxy, alkyoxy, aryloxy, aralkyloxy, nitro, amino, amido, aryl and heteroaryl; 
       
       or taken together with R 5a  and the nitrogen to which it is attached forms a 4- to 8-membered heterocyclyl comprising 0 or 1 additional heteroatoms;
 each R 6  independently is hydrogen, alkyl or halo; or two geminal R 6  taken together are ethylene, propylene or butylene; 
 R 7a  is hydrogen, lower alkyl, lower haloalkyl, cyano, halo, lower alkoxy, or C 3 -C 5  cycloalkyl, optionally substituted with 1, 2 or 3 substituents independently selected from the group consisting of cyano, lower alkoxy and halo; and 
 R 7b  is hydrogen, lower alkyl, lower haloalkyl, cyano, halo, lower alkoxy, or C 3 -C 5  cycloalkyl, optionally substituted with 1, 2 or 3 substituents independently selected from the group consisting of cyano, lower alkoxy and halo. 
 
     
     
         104 . The compound of  claim 103 , wherein R 24  is hydrogen or alkyl. 
     
     
         105 . The compound of  claim 103 , wherein R 25a  is hydrogen, alkyl, —O-alkyl, halogen, trifluoroalkyl, —O-trifluoromethyl, or —SO 2 -trifluoromethyl. 
     
     
         106 . The compound of  claim 105 , wherein R 25b  is hydrogen, alkyl, halogen, or trifluoroalkyl. 
     
     
         107 . The compound of  claim 106 , wherein R 25c  is hydrogen, alkyl, or halogen; and R 25d  is hydrogen. 
     
     
         108 . The compound of  claim 103 , wherein the compound is selected from the group consisting of: 
       
         
           
           
               
               
           
         
       
       and pharmaceutically acceptable salts, hydrates, enantiomers and stereoisomers thereof. 
     
     
         109 . The compound of  claim 100 , wherein R 2  is 
       
         
           
           
               
               
           
         
       
     
     
         110 . The compound of  claim 109 , wherein Y is —NH—, —N(alkyl)-, —O—, or —CH 2 —. 
     
     
         111 . The compound of  claim 109 , wherein R 22a  is substituted phenyl or substituted benzyl. 
     
     
         112 . The compound of  claim 109 , wherein R 22a  is 
       
         
           
           
               
               
           
         
         
           
           
               
               
           
         
       
     
     
         113 . The compound of  claim 109 , wherein R 22b  is hydrogen or methyl. 
     
     
         114 . The compound of  claim 100 , wherein A is 
       
         
           
           
               
               
           
         
       
     
     
         115 . The compound of  claim 100 , wherein the compound is selected from the group consisting of: 
       
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
         
           
           
               
               
           
         
       
       and pharmaceutically acceptable salts, hydrates, enantiomers and stereoisomers thereof. 
     
     
         116 . A pharmaceutical composition comprising a compound of  claim 100  and a pharmaceutically acceptable diluent or carrier. 
     
     
         117 . A kit or packaged pharmaceutical comprising a compound of  claim 100  and instructions for use thereof. 
     
     
         118 . A method of treating cancer, comprising administering to a subject in need thereof a therapeutically effective amount of a compound of  claim 100 . 
     
     
         119 . A compound selected from the group consisting of: 
       
         
           
           
               
               
           
         
       
       and pharmaceutically acceptable salts, hydrates, enantiomers and stereoisomers thereof.

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