US2015218277A1PendingUtilityA1

Inhibitors of the Epidermal Growth Factor Receptor- Heat Shock Protein 90 Binding Interaction

Assignee: UNIV MICHIGANPriority: Dec 20, 2010Filed: Apr 23, 2015Published: Aug 6, 2015
Est. expiryDec 20, 2030(~4.4 yrs left)· nominal 20-yr term from priority
A61K 31/7068A61K 38/00C07K 14/71C07K 2319/95C12N 15/1138A61K 38/08C07K 5/10A61K 31/7088C07K 2319/10A61K 9/0019A61K 38/07C07K 2317/626A61P 35/00A61N 5/10C12N 2310/16A61K 39/39558A61K 2039/505C07K 2317/569C07K 2317/622C07K 7/06C07K 2317/55C07K 16/2863A61K 33/24A61K 33/243
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Claims

Abstract

Provided herein are compounds that inhibit a binding interaction between an epidermal growth factor receptor (EGFR) and a heat shock protein 90 (HSP90), as well as compositions, e.g., pharmaceutical compositions, comprising the same, and related kits. In some embodiments, the compound is an antibody or antibody analog, and, in other embodiments, the compound is a peptide or peptide analog. Also provided are methods of using the compounds, including methods of increasing degradation of an EGFR, methods of treating cancer, and methods of sensitizing tumors to radiation therapy.

Claims

exact text as granted — not AI-modified
What is claimed: 
     
         1 . A composition comprising a compound that inhibits a binding interaction between an epidermal growth factor receptor (EGFR) and a heat shock protein 90 (HSP90). 
     
     
         2 . The composition of  claim 1 , wherein the compound is a peptide or peptide analog. 
     
     
         3 . The composition of  claim 2 , wherein the peptide analog is a peptoid, or peptidomimetic. 
     
     
         4 . The composition of  claim 2  or  3 , wherein the compound comprises 4 to 10 consecutive amino acids of amino acids 688 to 955 of SEQ ID NO: 1. 
     
     
         5 . The composition of  claim 4 , wherein the compound comprises 4 to 10 consecutive amino acids from amino acids 761-781 of the EGFR. 
     
     
         6 . The composition of  claim 5 , wherein the compound comprises the amino acid sequence DNPH (SEQ ID NO: 13) or RLLGIC (SEQ ID NO: 14). 
     
     
         7 . The composition of  claim 6 , wherein the compound comprises the amino acid sequence SVDNPH (SEQ ID NO: 15), or SVDNPHV (SEQ ID NO: 16), or SVDNPHVX (SEQ ID NO: 17), wherein X is C, S, G, V, or A. 
     
     
         8 . The composition of  claim 2  or  3 , wherein the compound comprises an amino acid sequence of SVDNPH (SEQ ID NO: 15) with up to two amino acid substitutions. 
     
     
         9 . The composition of  claim 8 , wherein the amino acid substitution(s) occur(s) at one or two of the positions 1, 3, and 5 of SVDNPH (SEQ ID NO: 15). 
     
     
         10 . The composition of  claim 9 , wherein the compound comprises S, D, I, or A at position 1 of SEQ ID NO: 15. 
     
     
         11 . The composition of  claim 9  or  10 , wherein the compound comprises D, A, or G at position 3 of SEQ ID NO: 15. 
     
     
         12 . The composition of any of  claims 8  to  11 , wherein the analog comprises P or G at position 5 of SEQ ID NO: 15. 
     
     
         13 . The composition of any of  claims 8  to  12 , wherein the peptide or peptidomimetic comprises an amino acid sequence selected from the group consisting of: 
       
         
           
                 
                 
               
                     
                   a. 
                 
                 
               
                   (SEQ ID NO: 25) 
                 
                 
                 
               
                     
                   AVDNPH, 
                 
                     
                     
                 
                     
                   b. 
                 
                 
               
                   (SEQ ID NO: 26) 
                 
                 
                 
               
                     
                   DVDNPH, 
                 
                     
                     
                 
                     
                   c. 
                 
                 
               
                   (SEQ ID NO: 27) 
                 
                 
                 
               
                     
                   IVDNPH, 
                 
                     
                     
                 
                     
                   d. 
                 
                 
               
                   (SEQ ID NO: 28) 
                 
                 
                 
               
                     
                   SVGNPH, 
                 
                     
                     
                 
                     
                   e. 
                 
                 
               
                   (SEQ ID NO: 29) 
                 
                 
                 
               
                     
                   SVDNGH, 
                 
                     
                   and 
                 
                     
                     
                 
                     
                   f. 
                 
                 
               
                   (SEQ ID NO: 30) 
                 
                 
                 
               
                     
                   SVAAPH. 
                 
             
                
               
            
             
                
               
            
             
                
                
                
               
            
             
                
               
            
             
                
                
                
               
            
             
                
               
            
             
                
                
                
               
            
             
                
               
            
             
                
                
                
               
            
             
                
               
            
             
                
                
                
                
               
            
             
                
               
            
             
                
               
            
           
         
       
     
     
         14 . The composition of any of  claims 2  to  13 , comprising an intramolecular bridge which covalently links the side chains of two amino acids of the compound. 
     
     
         15 . The composition of  claim 14 , wherein the two amino acids are separated by 3, 4, or 5 amino acids in the amino acid sequence of the compound. 
     
     
         16 . The composition of  claim 14  or  15 , wherein the intramolecular bridge is a disulfide bridge, a dithioether bridge, a carba analog bridge, or a lactam bridge. 
     
     
         17 . The composition of  claim 16 , wherein the dithioether comprises the structure —S(CH 2 ) n S—, wherein n is 1, 2, 3, 4, or 5. 
     
     
         18 . The composition of  claim 16 , wherein the carba analog bridge comprises a C3 to C10 alkyl chain. 
     
     
         19 . The composition of  claim 16 , wherein the lactam is formed between the side chains of an amino acid of Formula I and an amino acid of Formula II. 
     
     
         20 . The composition of  claim 19 , wherein the amino acid of Formula I is Lys or Orn 
     
     
         21 . The composition of  claim 19  or  20 , wherein the amino acid of Formula II is Asp or Glu. 
     
     
         22 . The composition of any of  claims 14  to  21 , comprising the amino acid sequence XDNPHX (SEQ ID NO: 32), wherein the side chains of the amino acids at positions 1 and 6 are covalently linked by the intramolecular bridge. 
     
     
         23 . The composition of  claim 22 , wherein each of the amino acids at positions 1 and 6 is Cys. 
     
     
         24 . The composition of  claim 23 , wherein the side chains of the amino acids at positions 1 and 6 are linked by a disulfide bond or a dithioether. 
     
     
         25 . The composition of  22 , wherein the intramolecular bridge is a lactam and one of the amino acids at positions 1 and 6 is an amino acid of Formula I and the other amino acid is an amino acid of Formula II. 
     
     
         26 . The composition of any of  claims 22  to  25 , comprising the amino acid sequence SXDNPHXX (SEQ ID NO: 33), wherein the X at position 8 is C, S, G, V, or A. 
     
     
         27 . The composition of any of  claims 2  to  26 , wherein the first amino acid of the peptide or peptide analog is acetylated. 
     
     
         28 . The composition of any of  claims 2  to  27 , wherein the last amino acid of the peptide or peptide analog is amidated. 
     
     
         29 . The composition of any of  claims 2  to  28 , wherein the peptide or peptide analog is an 8-mer. 
     
     
         30 . The composition of any of  claims 2  to  29 , wherein the peptide or peptide analog is fused to a cell penetrating peptide (CPP). 
     
     
         31 . The composition of  claim 30 , wherein the CPP comprises the amino acid sequence YGRKKRRQRRR (SEQ ID NO: 31). 
     
     
         32 . The composition of any of  claims 2  to  31 , comprising a peptide delivery agent. 
     
     
         33 . The composition of  claim 1 , wherein the compound is an antibody, or an antigen binding fragment thereof, or an aptamer. 
     
     
         34 . The composition of  claim 33 , wherein the antigen binding fragment is a fab, f(ab) 2 ′, fab 3 , scFv, diabody, triabody, tetrabody, minibody, or single-domain antibody. 
     
     
         35 . The composition of any of  claim 1 ,  33  or  34 , wherein the compound binds to an epitope within amino acids 688 to 955 of EGFR (SEQ ID NO: 1). 
     
     
         36 . The composition of  claim 35 , wherein the compound binds to an epitope within amino acids 761-781 of the EGFR sequence (SEQ ID NO: 1). 
     
     
         37 . The composition of  claim 36 , wherein the compound binds to an epitope within amino acids 768-773 of the SEQ ID NO: 1, amino acids 768-775 of SEQ ID NO: 1, or amino acids 776-781 of SEQ ID NO: 1. 
     
     
         38 . The composition of  claim 37 , wherein the epitope comprises the amino acid sequence DNPH (SEQ ID NO: 13) or RLLGIC (SEQ ID NO: 14). 
     
     
         39 . The composition of  claim 38 , wherein the epitope comprises the amino acid sequence SVDNPH (SEQ ID NO: 15), or SVDNPHV (SEQ ID NO: 16), SVDNPHVX (SEQ ID NO: 17), wherein X is C, S, G, V, or A. 
     
     
         40 . The composition of any of the preceding claims, comprising a pharmaceutically acceptable carrier, diluents, or excipient. 
     
     
         41 . The composition of  claim 40 , formulated for injection into an animal or human. 
     
     
         42 . A method of treating cancer in a subject comprising administering to the subject a composition of  claim 40  or  41  in an amount effective to treat the cancer. 
     
     
         43 . The method of  claim 42 , wherein the cancer is characterized by overexpression of EGFR or expression of a mutant EGFR. 
     
     
         44 . The method of  claim 43 , wherein the mutant EGFR is a T790M EGFR mutant, EGFRvIII mutant, or a L858R EGFR mutant. 
     
     
         45 . The method of any of  claims 42  to  44 , wherein the cancer is resistant to treatment with a tyrosine kinase inhibitor or a monoclonal antibody. 
     
     
         46 . The method of  claim 45 , wherein the tyrosine kinase inhibitor is erlotinib or gefitinib, or wherein the monoclonal antibody is cetuximab or panitumumab. 
     
     
         47 . The method of any of  claims 42  to  46 , wherein the cancer is a lung cancer, head and neck cancer, cervical cancer, glioblastoma, colorectal cancer, breast. 
     
     
         48 . The method of any of  claims 42  to  47 , comprising administering to the subject radiation therapy or chemotherapy. 
     
     
         49 . The method of  claim 48 , wherein the chemotherapy comprises cisplatin and/or gemcitabine administration. 
     
     
         50 . A method of sensitizing tumors to radiation therapy, chemotherapy, or a combination thereof, in a subject, comprising administering to the subject a composition of any of  claims 1  to  29  in an amount effective to sensitize the tumors to the therapy. 
     
     
         51 . The method of  claim 50 , wherein the composition is administered to the subject prior to administration of the radiation therapy and/or chemotherapy. 
     
     
         52 . The method of  claim 51 , wherein the composition is administered to the subject at the same time as the radiation therapy and/or chemotherapy. 
     
     
         53 . A method of increasing degradation of an EGFR in a cell, comprising contacting the cell with a composition of any of  claims 1  to  41  in an amount effective to increase degradation. 
     
     
         54 . A kit comprising the composition of any of  claims 1  to  41  in combination with an agent used in radiation therapy or chemotherapy. 
     
     
         55 . The composition of  claim 40  or  41  for treating cancer in a subject. 
     
     
         56 . The composition of  claim 55 , wherein the cancer is characterized by overexpression of EGFR or expression of a mutant EGFR. 
     
     
         57 . The composition of  claim 56 , wherein the mutant EGFR is a T790M EGFR mutant, EGFRvIII mutant, or a L858R EGFR mutant. 
     
     
         58 . The composition of any of  claims 55  to  57 , wherein the cancer is resistant to treatment with a tyrosine kinase inhibitor or a monoclonal antibody. 
     
     
         59 . The composition of  claim 58 , wherein the tyrosine kinase inhibitor is erlotinib or gefitinib, or wherein the monoclonal antibody is cetuximab or panitumumab. 
     
     
         60 . The composition of any of  claims 55  to  59 , wherein the cancer is a lung cancer, head and neck cancer, cervical cancer, glioblastoma, colorectal cancer, breast. 
     
     
         61 . The composition of any of  claims 1  to  41  for sensitizing tumors to radiation therapy, chemotherapy, or a combination thereof, in a subject. 
     
     
         62 . The composition of  claim 61 , wherein the composition is administered to the subject prior to administration of the radiation therapy and/or chemotherapy. 
     
     
         63 . The composition of  claim 61 , wherein the composition is administered to the subject at the same time as the radiation therapy and/or chemotherapy. 
     
     
         64 . The composition of any of  claims 1  to  41  for increasing degradation of an EGFR in a cell in a subject.

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