US2014155431A1PendingUtilityA1
Modulators of atp-binding cassette transporters
Est. expiryJun 24, 2024(expired)· nominal 20-yr term from priority
Inventors:Sara Sabina Hadida-RuahAnna HazlewoodPeter D.J. GrootenhuisFredrick Van GoorAshvani SinghJinglan ZhouJason Mccartney
A61P 5/10A61P 3/10A61P 7/00A61P 43/00A61P 9/00A61P 37/02A61P 7/02A61P 5/16A61P 7/12A61P 5/14A61P 7/04A61P 7/10A61P 3/06A61P 37/00A61P 5/18A61P 5/00A61P 37/06A61P 35/00A61P 31/00A61P 27/04A61P 25/00A61P 3/00A61P 25/16A61P 25/28A61P 25/14A61P 29/00A61P 27/02A61P 17/00A61P 19/08A61P 21/04A61P 11/00A61P 21/00A61P 13/12A61P 13/02A61P 11/08A61P 1/00A61P 19/00A61P 1/10A61P 1/12A61P 21/02A61K 31/4045C07D 209/12A61K 31/4709A61K 31/472C07D 209/14C07D 213/73C07C 213/02C07C 2602/10A61K 31/404C07C 205/43C07C 205/58C07D 215/56C07D 209/42C07C 69/96A61K 31/27C07C 68/00C07D 215/38C07D 413/12A61K 31/47A61K 31/265A61K 31/538A61K 31/44C07D 223/16A61K 31/5415C07C 2603/74C07C 255/58C07D 409/12C07D 213/20G01N 33/566C07C 311/08A61K 31/136G01N 33/48728C07D 417/12C07D 209/20G01N 33/5035A61K 31/403A61K 31/04C07D 311/58A61K 31/4747C07C 205/11C07D 209/04C07C 2601/18C07D 209/08C07D 215/233C07C 209/00C07D 209/96C07C 2601/14C07C 311/39C07D 405/12C07D 401/14C07C 271/20C07D 217/06C07D 209/18C07C 68/02C07D 279/16C07C 215/28C07D 401/12C07D 215/227C07C 219/34G01N 33/6872C07D 217/04A61K 31/277C07C 211/52C07C 211/50G01N 2333/705C07C 217/76C07D 265/36C07C 215/78C07C 215/76C07C 229/52C07D 209/94C07C 201/08C07D 471/10A61K 31/55A61K 8/4926C07C 211/17C07C 215/70C07C 217/84A61K 45/06C07C 217/80
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Claims
Abstract
The present invention relates to modulators of ATP-Binding Cassette (“ABC”) transporters or fragments thereof, including Cystic Fibrosis Transmembrane Conductance Regulator, compositions thereof, and methods therewith. The present invention also relates to methods of treating ABC transporter mediated diseases using such modulators.
Claims
exact text as granted — not AI-modifiedWhat is claimed is:
1 . A compound of formula I:
or a pharmaceutically acceptable salt thereof, wherein:
Ar 1 is a 5-6 membered aromatic monocyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, wherein said ring is optionally fused to a 5-12 membered monocyclic or bicyclic, aromatic, partially unsaturated, or saturated ring, wherein each ring contains 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, wherein Ar 1 has m substituents each independently selected from —WR W ;
W is a bond or is an optionally substituted C 1 -C 6 alkylidene chain wherein up to two methylene units of W are optionally and independently replaced by —CO—, —CS—, —COCO—, —CONR′—, —CONR′NR′—, —CO 2 —, —OCO—, —NR′CO 2 —, —O—, —NR′CONR′—, —OCONR′—, —NR′NR′, —NR′NR′CO—, —NR′CO—, —S—, —SO, —SO 2 —, —NR′—, —SO 2 NR′—, NR′SO 2 —, —NR′SO 2 NR′—;
R W is independently R′, halo, NO 2 , CN, CF 3 , or OCF 3 ;
m is 0-5;
each of R 1 , R 2 , R 3 , R 4 , and R 5 is independently —X—R X ;
X is a bond or is an optionally substituted C 1 -C 6 alkylidene chain wherein up to two methylene units of X are optionally and independently replaced by —CO—, —CS—, —COCO—, —CONR′—, —CONR′NR′—, —CO 2 —, —OCO—, —NR′CO 2 —, —O—, —NR′CONR′—, —OCONR′—, —NR′NR′, —NR′NR′CO—, —NR′CO—, —S—, —SO, —SO 2 —, —NR′—, —SO 2 NR′—, NR′SO 2 —, or —NR′SO 2 NR′—;
R X is independently R′, halo, NO 2 , CN, CF 3 , or OCF 3 ;
R 6 is hydrogen, CF 3 , —OR′, —SR′, or an optionally substituted C 1-8 aliphatic group;
R 7 is hydrogen or a C 1-6 aliphatic group optionally substituted with —X—R X ;
R′ is independently selected from hydrogen or an optionally substituted group selected from a C 1 -C 8 aliphatic group, a 3-8-membered saturated, partially unsaturated, or fully unsaturated monocyclic ring having 0-3 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or an 8-12 membered saturated, partially unsaturated, or fully unsaturated bicyclic ring system having 0-5 heteroatoms independently selected from nitrogen, oxygen, or sulfur; or two occurrences of R′ are taken together with the atom(s) to which they are bound to form an optionally substituted 3-12 membered saturated, partially unsaturated, or fully unsaturated monocyclic or bicyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur;
provided that:
i) when R 1 , R 2 , R 3 , R 4 , R 5 , R 6 and R 7 are hydrogen, then Ar 1 is not phenyl, 2-methoxyphenyl, 4-methoxyphenyl, 2-methylphenyl, 2,6-dichlorophenyl, 2,4-dichlorophenyl, 2-bromophenyl, 4-bromophenyl, 4-hydroxyphenyl, 2,4-dinitrophenyl, 3,5-dicarboxylic acid phenyl, 2,4-dimethylphenyl, 2,6-dimethylphenyl, 2-ethylphenyl, 3-nitro-4-methylphenyl, 3-carboxylic-acid phenyl, 2-fluorophenyl, 3-fluorophenyl, 3-trifluoromethylphenyl, 3-ethoxyphenyl, 4-chlorophenyl, 3-methoxyphenyl, 4-dimethylaminophenyl, 3,4-dimethylphenyl, 2-ethylphenyl, or 4-ethoxycarbonylphenyl;
ii) when R 1 , R 2 , R 3 , R 5 , R 6 and R 7 are hydrogen, and R 4 is methoxy, then Ar 1 is not 2-fluorophenyl or 3-fluorophenyl;
iii) when R 1 , R 3 , R 4 , R 5 , R 6 and R 7 are hydrogen, R 2 is 1,2,3,4-tetrahydroisoquinolin-1-yl-sulfonyl, then Ar 1 is not 3-trifluoromethylphenyl;
iv) when R 1 , R 2 , R 3 , R 4 , R 5 and R 7 are hydrogen, R 6 is methyl, then Ar 1 is not phenyl;
v) when R 1 , R 4 , R 5 , R 6 and R 7 are hydrogen, R 2 and R 3 , taken together, are methylenedioxy, then Ar 1 is not 4-chlorophenyl, 4-bromophenyl, 4-nitrophenyl, 4-carboethoxyphenyl, 6-ethoxy-benzothiazol-2-yl, 6-carboethoxy-benzothiazol-2-yl, 6-halo-benzothiazol-2-yl, 6-nitro-benzothiazol-2-yl, or 6-thiocyano-benzothiazol-2-yl.
vi) when R 1 , R 4 , R 5 , R 6 and R 7 are hydrogen, R 2 and R 3 , taken together, are methylenedioxy, then Ar 1 is not 4-substituted phenyl wherein said substituent is —SO 2 NHR xx , wherein R xx is 2-pyridinyl, 4-methyl-2-pyrimidinyl, 3,4-dimethyl-5-isoxazolyl;
vii) when R 1 , R 2 , R 3 , R 4 , R 5 , R 6 , and R 7 are hydrogen, then Ar 1 is not thiazol-2-yl, 1H-1,2,4-triazol-3-yl, or 1H-1,3,4-triazol-2-yl;
viii) when R 1 , R 2 , R 3 , R 5 , R 6 , and R 7 are hydrogen, and R 4 is CF 3 , OMe, chloro, SCF 3 , or OCF 3 , then Ar 1 is not 5-methyl-1,2-oxazol-3-yl, thiazol-2-yl, 4-fluorophenyl, pyrimidin-2-yl, 1-methyl-1,2-(1H)-pyrazol-5-yl, pyridine-2-yl, phenyl, N-methyl-imidazol-2-yl, imidazol-2-yl, 5-methyl-imidazol-2-yl, 1,3-oxazol-2-yl, or 1,3,5-(1H)-triazol-2-yl;
ix) when R 1 , R 2 , R 3 , R 4 , R 5 , R 6 , and R 7 each is hydrogen, then Ar 1 is not pyrimidin-2-yl, 4,6-dimethyl-pyrimidin-2-yl, 4-methoxy-6-methyl-1,3,5-triazin-2-yl; 5-bromo-pyridin-2-yl, pyridin-2-yl, or 3,5-dichloro-pyridin-2-yl;
x) when R 1 , R 2 , R 3 , R 4 , R 5 and R 7 each is hydrogen, R 6 is hydroxy, then Ar 1 is not 2,6-dichloro-4-aminosulfonyl-phenyl;
xi) when R 2 or R 3 is an optionally substituted N-piperazyl, N-piperidyl, or N-morpholinyl, then Ar 1 is not an optionally substituted ring selected from thiazol-2-yl, pyridyl, phenyl, thiadiazolyl, benzothiazol-2-yl, or indazolyl;
xii) when R 2 is optionally substituted cyclohexylamino, then Ar 1 is not optionally substituted phenyl, pyridyl, or thiadiazolyl;
xiii) Ar 1 is not optionally substituted tetrazolyl;
xiv) when R 2 , R 4 , R 5 , R 6 , and R 7 each is hydrogen, and R 1 and R 3 both are simultaneously CF 3 , chloro, methyl, or methoxy, then Ar 1 is not 4,5-dihydro-1,3-thiazol-2-yl, thiazol-2-yl, or [3,5-bis(trifluoromethyl)-1H-1-pyrazol-1-yl]phenyl;
xv) when R 1 , R 4 , R 5 , R 6 , and R 7 each is hydrogen, and Ar 1 is thiazol-2-yl, then neither R 2 nor R 3 is isopropyl, chloro, or CF 3 ;
xvi) when Ar 1 is 4-methoxyphenyl, 4-trifluoromethylphenyl, 2-fluorophenyl, phenyl, or 3-chlorophenyl, then:
a) when R 1 , R 2 , R 4 , R 5 , R 6 , and R 7 each is hydrogen, then R 3 is not methoxy; or
b) when R 1 , R 3 , R 4 , R 5 , R 6 , and R 7 each is hydrogen, then R 2 is not chloro; or
c) when R 1 , R 2 , R 3 , R 5 , R 6 , and R 7 each is hydrogen, then R 4 is not methoxy; or
d) when R 1 , R 3 , R 4 , R 6 , and R 7 each is hydrogen, and R 5 is ethyl, then R 2 is not chloro;
e) when R 1 , R 2 , R 4 , R 5 , R 6 , and R 7 each is hydrogen, then R 3 is not chloro;
xvi) when R 1 , R 3 , R 4 , R 5 , R 6 , and R 7 each is hydrogen, and R 2 is CF 3 or OCF 3 , then Ar 1 is not [3,5-bis(trifluoromethyl)-1H-pyrazol-1-yl]phenyl;
xvii) when R 1 , R 2 , R 4 , R 5 , R 6 , and R 7 each is hydrogen, and R 3 is hydrogen or CF3, then Ar1 is not a phenyl substituted with —OCH 2 CH 2 Ph, —OCH 2 CH 2 (2-trifluoromethyl-phenyl), —OCH 2 CH 2 -(6,7-dimethoxy-1,2,3,4-tetrahydroisoquinolin-2-yl), or substituted 1H-pyrazol-3-yl; and
xviii) the following two compounds are excluded:
2 . The compound according to claim 1 , wherein Ar 1 is selected from:
wherein ring A 1 5-6 membered aromatic monocyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur; or
A 1 and A 2 , together, is an 8-14 aromatic, bicyclic or tricyclic aryl ring, wherein each ring contains 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
3 . The compound according to claim 2 , wherein A 1 is an optionally substituted 6 membered aromatic ring having 0-4 heteroatoms, wherein said heteroatom is nitrogen.
4 . The compound according to claim 2 , wherein A 1 is an optionally substituted phenyl.
5 . The compound according to claim 2 , wherein A 2 is an optionally substituted 6 membered aromatic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
6 . The compound according to claim 2 , wherein A 2 is an optionally substituted 5-membered aromatic ring having 0-3 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
7 . The compound according to claim 2 , wherein A 2 is a 5-membered aromatic ring having 1-2 nitrogen atoms.
8 . The compound according to claim 2 , wherein A 2 is selected from:
wherein ring A 2 is fused to ring A 1 through two adjacent ring atoms.
9 . The compound according to claim 1 , wherein R 5 and R 6 is hydrogen.
10 . The compound according to claim 9 , wherein R 3 and R 4 are simultaneously hydrogen; R 1 is hydrogen or —OH; and R 2 is hydrogen or fluoro.
11 . The compound according to claim 10 , R 7 is hydrogen.
12 . The compound according to claim 1 , wherein each occurrence of WR W is independently —C1-C3 alkyl, C1-C3 perhaloalkyl, —O(C1-C3 alkyl), —CF 3 , —OCF 3 , —SCF 3 , —F, —Cl, —Br, or —COOR′, —COR′, —O(CH 2 ) 2 N(R′)(R′), —O(CH 2 )N(R′)(R′), —CON(R′)(R′), —(CH 2 ) 2 OR′, —(CH 2 )OR′, optionally substituted monocyclic or bicyclic aromatic ring, optionally substituted arylsulfone, optionally substituted 5-membered heteroaryl ring, —N(R′)(R′), —(CH 2 ) 2 N(R′)(R′), or —(CH 2 )N(R′)(R′).
13 . The compound according to claim 12 , wherein each occurrence of WR W is selected from halo, cyano, CF 3 , CHF 2 , OCHF 2 , Me, Et, CH(Me) 2 , CHMeEt, n-propyl, t-butyl, OMe, OEt, OPh, O-fluorophenyl, O-difluorophenyl, O-methoxyphenyl, O-tolyl, O-benzyl, SMe, SCF 3 , SCHF 2 , SEt, CH 2 CN, NH 2 , NHMe, N(Me) 2 , NHEt, N(Et) 2 , C(O)CH 3 , C(O)Ph, C(O)NH 2 , SPh, SO 2 -(amino-pyridyl), SO 2 NH 2 , SO 2 Ph, SO 2 NHPh, SO 2 —N-morpholino, SO 2 —N-pyrrolidyl, N-pyrrolyl, N-morpholino, 1-piperidyl, phenyl, benzyl, (cyclohexyl-methylamino)methyl, 4-Methyl-2,4-dihydro-pyrazol-3-one-2-yl, benzimidazol-2yl, furan-2-yl, 4-methyl-4H-[1,2,4]triazol-3-yl, 3-(4′-chlorophenyl)-[1,2,4]oxadiazol-5-yl, NHC(O)Me, NHC(O)Et, NHC(O)Ph, NHSO 2 Me, 2-indolyl, 5-indolyl, —CH 2 CH 2 OH, —OCF 3 , O-(2,3-dimethylphenyl), 5-methylfuryl, —SO 2 —N-piperidyl, 2-tolyl, 3-tolyl, 4-tolyl, O-butyl, NHCO 2 C(Me) 3 , CO 2 C(Me) 3 , isopropenyl, n-butyl, O-(2,4-dichlorophenyl), NHSO 2 PhMe, O-(3-chloro-5-trifluoromethyl-2-pyridyl), phenylhydroxymethyl, 2,5-dimethylpyrrolyl, NHCOCH 2 C(Me) 3 , O-(2-tert-butyl)phenyl, 2,3-dimethylphenyl, 3,4-dimethylphenyl, 4-hydroxymethyl phenyl, 4-dimethylaminophenyl, 2-trifluoromethylphenyl, 3-trifluoromethylphenyl, 4-trifluoromethylphenyl, 4-cyanomethylphenyl, 4-isobutylphenyl, 3-pyridyl, 4-pyridyl, 4-isopropylphenyl, 3-isopropylphenyl, 2-methoxyphenyl, 3-methoxyphenyl, 4-methoxyphenyl, 3,4-methylenedioxyphenyl, 2-ethoxyphenyl, 3-ethoxyphenyl, 4-ethoxyphenyl, 2-methylthiophenyl, 4-methylthiophenyl, 2,4-dimethoxyphenyl, 2,5-dimethoxyphenyl, 2,6-dimethoxyphenyl, 3,4-dimethoxyphenyl, 5-chloro-2-methoxyphenyl, 2-OCF 3 -phenyl, 3-trifluoromethoxy-phenyl, 4-trifluoromethoxyphenyl, 2-phenoxyphenyl, 4-phenoxyphenyl, 2-fluoro-3-methoxy-phenyl, 2,4-dimethoxy-5-pyrimidyl, 5-isopropyl-2-methoxyphenyl, 2-fluorophenyl, 3-fluorophenyl, 4-fluorophenyl, 3-cyanophenyl, 3-chlorophenyl, 4-chlorophenyl, 2,3-difluorophenyl, 2,4-difluorophenyl, 2,5-difluorophenyl, 3,4-difluorophenyl, 3,5-difluorophenyl, 3-chloro-4-fluoro-phenyl, 3,5-dichlorophenyl, 2,5-dichlorophenyl, 2,3-dichlorophenyl, 3,4-dichlorophenyl, 2,4-dichlorophenyl, 3-methoxycarbonylphenyl, 4-methoxycarbonyl phenyl, 3-isopropyloxycarbonylphenyl, 3-acetamidophenyl, 4-fluoro-3-methylphenyl, 4-methanesulfinyl-phenyl, 4-methanesulfonyl-phenyl, 4-N-(2-N,N-dimethylaminoethyl)carbamoylphenyl, 5-acetyl-2-thienyl, 2-benzothienyl, 3-benzothienyl, furan-3-yl, 4-methyl-2-thienyl, 5-cyano-2-thienyl, N′-phenylcarbonyl-N-piperazinyl, —NHCO 2 Et, —NHCO 2 Me, —NHSO 2 (CH 2 ) 2 N-piperidine, —NHSO 2 (CH 2 ) 2 N-morpholine, —NHSO 2 (CH 2 ) 2 N(Me) 2 , COCH 2 N(Me)COCH 2 NHMe, —CO 2 Et, O-propyl, —CH 2 CH 2 NHCO 2 C(Me) 3 , hydroxy, aminomethyl, pentyl, adamantyl, cyclopentyl, ethoxyethyl, C(Me) 2 CH 2 OH, C(Me) 2 CO 2 Et, —CHOHMe, CH 2 CO 2 Et, —C(Me) 2 CH 2 NHCO 2 C(Me) 3 , O(CH 2 ) 2 OEt, O(CH 2 ) 2 OH, CO 2 Me, hydroxymethyl, 1-methyl-1-cyclohexyl, 1-methyl-1-cyclooctyl, 1-methyl-1-cycloheptyl, C(Et) 2 C(Me) 3 , C(Et) 3 , CONHCH 2 CH(Me) 2 , 2-aminomethyl-phenyl, ethenyl, 1-piperidinylcarbonyl, ethynyl, cyclohexyl, 4-methylpiperidinyl, —OCO 2 Me, —C(Me) 2 CH 2 NHCO 2 CH 2 CH(Me) 2 , —C(Me) 2 CH 2 NHCO 2 CH 2 CH 2 CH 3 , —C(Me) 2 CH 2 NHCO 2 Et, —C(Me) 2 CH 2 NHCO 2 Me, —C(Me) 2 CH 2 NHCO 2 CH 2 C(Me) 3 , —CH 2 NHCOCF 3 , —CH 2 NHCO 2 C(Me) 3 , —C(Me) 2 CH 2 NHCO 2 (CH 2 ) 3 CH 3 , C(Me) 2 CH 2 NHCO 2 (CH 2 ) 2 OMe, C(OH)(CF 3 ) 2 , —C(Me) 2 CH 2 NHCO 2 CH 2 -tetrahydrofuran-3-yl, C(Me) 2 CH 2 O(CH 2 ) 2 OMe, or 3-ethyl-2,6-dioxopiperidin-3-yl.
14 . The compound according to claim 2 , wherein said compound has formula IIA or formula IIB:
15 . The compound according to claim 2 , wherein said compound has formula IIIA, formula IIIB, formula IIIC, formula IIID, or formula IIIE:
wherein:
each of X 1 , X 2 , X 3 , X 4 , and X 5 is independently selected from CH or N; and
X 6 is O, S, or NR′.
16 . The compound according to claim 15 , wherein X 1 , X 2 , X 3 , X 4 , and X 5 , taken together with WR W and m, is optionally substituted phenyl.
17 . The compounds according to claim 15 , wherein X 1 , X 2 , X 3 , X 4 , and X 5 taken together in compound of formula IIIA is an optionally substituted ring selected from:
18 . The compound according to claim 15 , wherein X 1 , X 2 , X 3 , X 4 , X 5 , or X 6 , taken together with ring A 2 in compounds of formula IIIB, formula IIIC, formula IIID, or formula IIIE, is an optionally substituted ring selected from:
19 . The compound according to claim 15 , wherein said compound has formula IVA, formula IVB, or formula IVC:
20 . The compound according to claim 19 , wherein ring A 2 is an optionally substituted, saturated, unsaturated, or aromatic 5-7 membered ring with 0-3 heteroatoms selected from O, S, or N.
21 . The compound according to claim 19 , wherein said compound has formula VA-1:
wherein each of WR W2 and WR W4 is independently selected from hydrogen, CN, CF 3 , halo, C1-C6 straight or branched alkyl, 3-12 membered cycloaliphatic, phenyl, C5-C10 heteroaryl or C3-C7 heterocyclic, wherein said heteroaryl or heterocyclic has up to 3 heteroatoms selected from O, S, or N, wherein said WR W2 and WR W4 is independently and optionally substituted with up to three substituents selected from —OR′, —CF 3 , —OCF 3 , SR′, S(O)R′, SO 2 R′, —SCF 3 , halo, CN, —COOR′, —COR′, —O(CH 2 ) 2 N(R′)(R′), —O(CH 2 )N(R′)(R′), —CON(R′)(R′), —(CH 2 ) 2 OR′, —(CH 2 )OR′, CH 2 CN, optionally substituted phenyl or phenoxy, —N(R′)(R′), —NR′C(O)OR′, —NR′C(O)R′, —(CH 2 ) 2 N(R′)(R′), or —(CH 2 )N(R′)(R′); and
WR W5 is selected from hydrogen, —OH, NH 2 , CN, CHF 2 , NHR′, N(R) 2 , —NHC(O)R′, —NHC(O)OR′, NHSO 2 R′, —OR′, CH 2 OH, CH2N(R′) 2 , C(O)OR′, SO 2 NHR′, SO 2 N(R′) 2 , or CH 2 NHC(O)OR′. Or, WR W4 and WR W5 taken together form a 5-7 membered ring containing 0-3 three heteroatoms selected from N, O, or S, wherein said ring is optionally substituted with up to three WR W substituents.
22 . The compound according to claim 21 , wherein:
each of WR W2 and WR W4 is independently selected from hydrogen, CN, CF 3 , halo, C1-C6 straight or branched alkyl, 3-12 membered cycloaliphatic, or phenyl, wherein said WR W2 and WR W4 is independently and optionally substituted with up to three substituents selected from —OR′, —CF 3 , —OCF 3 , —SCF 3 , halo, —COOR′, —COR′, —O(CH 2 ) 2 N(R′)(R′), —O(CH 2 )N(R′)(R′), —CON(R′)(R′), —(CH 2 ) 2 OR′, —(CH 2 )OR′, optionally substituted phenyl, —N(R′)(R′), —NC(O)OR′, —NC(O)R′, —(CH 2 ) 2 N(R′)(R′), or —(CH 2 )N(R′)(R′); and WR W5 is selected from hydrogen, —OH, NH 2 , CN, NHR′, N(R′) 2 , —NHC(O)R′, —NHC(O)OR′, NHSO 2 R′, —OR′, CH 2 OH, C(O)OR′, SO 2 NHR′, or CH 2 NHC(O)O—(R′).
23 . The compound according to claim 22 , wherein:
WR W2 is a phenyl ring optionally substituted with up to three substituents selected from —OR′, —CF 3 , —OCF 3 , SR′, S(O)R′, SO 2 R′, —SCF 3 , halo, CN, —COOR′, —COR′, —O(CH 2 ) 2 N(R′)(R′), —O(CH 2 )N(R′)(R′), —CON(R′)(R′), —(CH 2 ) 2 OR′, —(CH 2 )OR′, CH 2 CN, optionally substituted phenyl or phenoxy, —N(R′)(R′), —NR′C(O)OR′, —NR′C(O)R′, —(CH 2 ) 2 N(R′)(R′), or —(CH 2 )N(R′)(R′); WR W4 is C1-C6 straight or branched alkyl; and WR W5 is OH.
24 . The compound according to claim 22 , wherein each of WR W2 and WR W4 is independently selected from CF 3 , halo, CN, or C1-C6 straight or branched alkyl.
25 . The compound according claim 24 , wherein each of WR W2 and WR W4 is independently selected from optionally substituted n-propyl, isopropyl, n-butyl, sec-butyl, t-butyl, 1,1-dimethyl-2-hydroxyethyl, 1,1-dimethyl-2-(ethoxycarbonyl)-ethyl, 1,1-dimethyl-3-(t-butoxycarbonyl-amino) propyl, or n-pentyl.
26 . The compound according claim 25 , wherein each of WR W2 and WR W4 is C1-C6 straight or branched alkyl.
27 . The compound according to claim 21 , wherein WR W5 is selected from hydrogen, CHF 2 , NH 2 , CN, NHR′, N(R′) 2 , CH 2 N(R′) 2 , —NHC(O)R′, —NHC(O)OR′, —OR′, C(O)OR′, or SO 2 NHR′.
28 . The compound according to claim 21 , wherein WR W5 is selected from hydrogen, NH 2 , CN, CHF 2 , NH(C1-C6 alkyl), N(C1-C6 alkyl) 2 , —NHC(O)(C1-C6 alkyl), —CH 2 NHC(O)O(C1-C6 alkyl), —NHC(O)O(C1-C6 alkyl), —OH, —O(C1-C6 alkyl), C(O)O(C1-C6 alkyl), CH 2 O(C1-C6 alkyl), or SO 2 NH 2 .
29 . The compound according to claim 28 , wherein WR W5 is selected from —OH, OMe, NH 2 , —NHMe, —N(Me) 2 , —CH 2 NH 2 , CH 2 OH, NHC(O)OMe, NHC(O)OEt, CN, CHF 2 , —CH 2 NHC(O)O(t-butyl), —O-(ethoxyethyl), —O-(hydroxyethyl), —C(O)OMe, or —SO 2 NH 2 .
30 . The compound according to claim 21 , wherein said compound has one, preferably more, or more preferably all, of the following features:
a. WR W2 is hydrogen; b. WR W4 is C1-C6 straight or branched alkyl or monocyclic or bicyclic aliphatic; and c. WR W5 is selected from hydrogen, CN, CHF 2 , NH 2 , NH(C1-C6 alkyl), N(C1-C6 alkyl) 2 , —NHC(O)(C1-C6 alkyl), —NHC(O)O(C1-C6 alkyl), —CH 2 C(O)O(C1-C6 alkyl), —OH, —O(C1-C6 alkyl), C(O)O(C1-C6 alkyl), or SO 2 NH 2 .
31 . The compound according to claim 21 , wherein said compound has one, preferably more, or more preferably all, of the following features:
a. WR W2 is halo, C1-C6 alkyl, CF 3 , CN, or phenyl optionally substituted with up to 3 substituents selected from C 1-C4 alkyl, —O(C1-C4 alkyl), or halo; b. WR W4 is CF 3 , halo, C1-C6 alkyl, or C 6 -C 10 cycloaliphatic; and c. WR W5 is OH, NH 2 , NH(C1-C6 alkyl), or N(C1-C6 alkyl).
32 . The compound according to claim 19 , wherein said compound has formula V-A-2:
wherein:
Y is CH 2 , C(O)O, C(O), or S(O) 2 ; and
m is 0-4.
33 . The compound according to claim 19 , wherein said compound has formula V-A-3:
wherein:
Q is W;
R Q is R W ;
m is 0-4; and
n is 0-4.
34 . The compound according to claim 19 , wherein said compound has formula V-A-4:
35 . The compound according to claim 19 , wherein said compound has formula V-A-5:
wherein:
m is 0-4.
36 . The compound according to claim 19 , wherein said compound has formula V-A-6:
wherein:
ring B is a 5-7 membered monocyclic or bicyclic, heterocyclic or heteroaryl ring optionally substituted with up to n occurrences of -Q-RQ;
Q is W;
R Q is R W ;
m is 0-4; and
n is 0-4.
37 . The compound according to claim 36 , wherein ring B is a 5-7 membered monocyclic, heterocyclic ring having up to 2 heteroatoms selected from O, S, or N, optionally substituted with up to n occurrences of -Q-R Q .
38 . The compound according to claim 36 , wherein ring B is a 5-6 membered monocyclic, heteroaryl ring having up to 2 heteroatoms selected from O, S, or N, optionally substituted with up to n occurrences of -Q-R Q .
39 . The compound according to claim 36 , wherein ring B is selected from N-morpholinyl, N-piperidinyl, 4-benzoyl-piperazin-1-yl, pyrrolidin-1-yl, or 4-methyl-piperidin-1-yl, benzimidazol-2-yl, 5-methyl-furan-2-yl, 2,5-dimethyl-pyrrol-1-yl, pyridine-4-yl, indol-5-yl, indol-2-yl, 2,4-dimethoxy-pyrimidin-5-yl, furan-2-yl, furan-3-yl, 2-acyl-thien-2-yl, benzothiophen-2-yl, 4-methyl-thien-2-yl, 5-cyano-thien-2-yl, 3-chloro-5-trifluoromethyl-pyridin-2-yl.
40 . The compound according to claim 19 , wherein said compound has formula V-B-1:
wherein:
one of Q 1 and Q 3 is N(WR W ) and the other of Q 1 and Q 3 is selected from O, S, or N(WR W );
Q 2 is C(O), CH 2 —C(O), C(O)—CH 2 , CH 2 , CH 2 —CH 2 , CF 2 , or CF 2 —CF 2 ; and
m is 0-3.
41 . The compound according to claim 40 , wherein Q 3 is N(WR W ), wherein WR W is hydrogen, C1-C6 aliphatic, C(O)C1-C6 aliphatic, or C(O)OC1-C6 aliphatic.
42 . The compound according to claim 41 , wherein Q 2 is C(O), CH 2 , CH 2 —CH 2 , and Q 1 is O.
43 . The compound according to claim 19 , wherein said compound has formula V-B-2:
wherein:
R W1 is hydrogen or C1-C6 aliphatic;
each of R W3 is hydrogen or C1-C6 aliphatic; or
both R W3 taken together form a C3-C6 cycloalkyl or heterocyclic ring having up to two heteroatoms selected from O, S, or NR′, wherein said ring is optionally substituted with up to two WR W substituents; and
m is 0-4.
44 . The compound according to claim 43 , wherein WR W1 is hydrogen, C1-C6 aliphatic, C(O)C1-C6 aliphatic, or C(O)OC1-C6 aliphatic.
45 . The compound according to claim 43 , wherein each R W3 is hydrogen, C1-C4 alkyl; or both R W3 taken together form a C3-C6 cycloaliphatic ring or 5-7 membered heterocyclic ring having up to two heteroatoms selected from O, S, or N, wherein said cycloaliphatic or heterocyclic ring is optionally substituted with up to three substitutents selected from WR W1 .
46 . The compound according to claim 19 , wherein said compound has formula V-B-3:
wherein:
Q 4 is a bond, C(O), C(O)O, or S(O) 2 ;
R W1 is hydrogen or C1-C6 aliphatic; and
m is 0-4.
47 . The compound according to claim 19 , wherein said compound has formula V-B-4:
wherein:
m is 0-4.
48 . The compound according to claim 19 , wherein said compound has formula V-B-5:
wherein:
ring A 2 is a phenyl or a 5-6 membered heteroaryl ring, wherein ring A 2 and the phenyl ring fused thereto together have up 4 substituents independently selected from WR W ; and
m is 0-4.
49 . The compound according to claim 48 , wherein ring A 2 is selected from:
wherein said ring is optionally substituted.
50 . The compound according to claim 19 , wherein said compound has formula V-B-5-a:
wherein:
G 4 is hydrogen, halo, CN, CF 3 , CHF 2 , CH 2 F, optionally substituted C1-C6 aliphatic, aryl-C 1 -C6 alkyl, or a phenyl, wherein G 4 is optionally substituted with up to 4 WR W substituents; wherein up to two methylene units of said C1-C6 aliphatic or C1-C6 alkyl is optionally replaced with —CO—, —CONR′—, —CO 2 —, —OCO—, —NR′CO 2 —, —O—, —NR′CONR′—, —OCONR′—, —NR′CO—, —S—, —NR′—, —SO 2 NR′—, NR′SO 2 —, or —NR′SO 2 NR′—.;
G 5 is hydrogen or an optionally substituted C1-C6 aliphatic;
wherein said indole ring system is further optionally substituted with up to 3 substituents independently selected from WR W .
51 . The compound according to claim 50 , wherein G 4 is hydrogen, and G 5 is C1-C6 aliphatic, wherein said aliphatic is optionally substituted with C1-C6 alkyl, halo, cyano, or CF 3 , and wherein up to two methylene units of said C 1-C6 aliphatic or C1-C6 alkyl is optionally replaced with —CO—, —CONR′—, —CO 2 —, —OCO—, —NR′CO 2 —, —O—, —NR′CONR′—, —OCONR′—, —NR′CO—, —S—, —NR′—, —SO 2 NR′—, NR′SO 2 —, or —NR′SO 2 NR′—.
52 . The compound according to claim 50 , wherein G 4 is hydrogen, and G 5 is cyano, methyl, ethyl, propyl, isopropyl, butyl, sec-butyl, t-butyl, cyanomethyl, methoxyethyl, CH 2 C(O)OMe, (CH 2 ) 2 —NHC(O)O-tert-But, or cyclopentyl.
53 . The compound according to claim 50 , wherein G 5 is hydrogen, and G 4 is halo, C1-C6 aliphatic or phenyl, wherein said aliphatic or phenyl is optionally substituted with C1-C6 alkyl, halo, cyano, or CF 3 , wherein up to two methylene units of said C1-C6 aliphatic or C1-C6 alkyl is optionally replaced with —CO—, —CONR′—, —CO 2 —, —OCO—, —NR′CO 2 —, —O—, —NR′CONR′—, —OCONR′—, —NR′CO—, —S—, —NR′—, —SO 2 NR′—, NR′SO 2 —, or —NR′SO 2 NR′—.
54 . The compound according to claim 50 , wherein G 5 is hydrogen, and G 4 is halo, ethoxycarbonyl, t-butyl, 2-methoxyphenyl, 2-ethoxyphenyl, (4-C(O)NH(CH 2 ) 2 —NMe 2 )-phenyl, 2-methoxy-4-chloro-phenyl, pyridine-3-yl, 4-isopropylphenyl, 2,6-dimethoxyphenyl, sec-butylaminocarbonyl, ethyl, t-butyl, or piperidin-1-ylcarbonyl.
55 . The compound according to claim 1 , wherein said compound is selected from Table 1.
56 . A compound having formula A-I:
or a salt thereof;
wherein:
G 1 is hydrogen, R′, C(O)R′, C(S)R′, S(O)R′, S(O) 2 R′, Si(CH 3 ) 2 R′, P(O)(OR′) 3 , P(S)(OR′) 3 , or B(OR′) 2 ;
G 2 is halo, CN, CF 3 , isopropyl, or phenyl wherein said isopropyl or phenyl is optionally substituted with up to 3 substituents independently selected from WR W , wherein W and R W are as defined above for formula I and embodiments thereof;
G 3 is an isopropyl or a C3-C10 cycloaliphatic ring, wherein said G 3 is optionally substituted with up to 3 substituents independently selected from WR W , wherein W and R W are as defined above for formula I and embodiments thereof;
provided that when G 1 is methoxy, G 3 is tert-butyl, then G 2 is not 2-amino-4-methoxy-5-tert-butyl-phenyl.
57 . The compound according to claim 56 , wherein:
G 1 is hydrogen; G 2 is halo or isopropyl, wherein said isopropyl is optionally substituted with up to 3 substituents independently selected from R′; and G 3 is an isopropyl or a C3-C10 cycloaliphatic ring, wherein said G 3 is optionally substituted with up to 3 substituents independently selected from R′.
58 . The compound according to claim 57 , wherein:
G 1 is hydrogen; G 2 is halo, preferably fluoro; and G 3 is a C3-C10 cycloaliphatic ring, wherein said G 3 is optionally substituted with up to 3 substituents independently selected from methyl, ethyl, propyl, or butyl.
59 . The compound according to claim 56 , wherein:
G 1 is hydrogen; G 2 is CN, halo, or CF 3 ; and G 3 is an isopropyl or a C3-C10 cycloaliphatic ring, wherein said G 3 is optionally substituted with up to 3 substituents independently selected from R′.
60 . The compound according to claim 56 , wherein:
G 1 is hydrogen; G 2 is phenyl is optionally substituted with up to 3 substituents independently selected from —OC1-C4 alkyl, CF 3 , halo, or CN; and G 3 is an isopropyl or a C3-C10 cycloaliphatic ring, wherein said G 3 is optionally substituted with up to 3 substituents independently selected from R′.
61 . The compound according to claim 56 , wherein G 3 is selected from optionally substituted cyclopentyl, cyclohexyl, cycloheptyl, or adamantyl.
62 . The compound according to claim 56 , wherein G 3 is C3-C8 branched aliphatic chain.
63 . A compound having formula A-II:
or a salt thereof, wherein:
G 4 is hydrogen, halo, CN, CF 3 , CHF 2 , CH 2 F, optionally substituted C1-C6 aliphatic, aralkyl, or a phenyl ring optionally substituted with up to 4 WR W substituents;
G 5 is hydrogen or an optionally substituted C1-C6 aliphatic;
provided that both, G 4 and G 5 , are not simultaneously hydrogen;
wherein said indole ring system is further optionally substituted with up to 3 substituents independently selected from WR W .
64 . The compound according to claim 63 , wherein G 4 is hydrogen, and G 5 is C1-C6 aliphatic, wherein said aliphatic is optionally substituted with C1-C6 alkyl, halo, cyano, or CF 3 , and wherein up to two methylene units of said C1-C6 aliphatic or C1-C6 alkyl is optionally replaced with —CO—, —CONR′—, —CO 2 —, —OCO—, —NR′CO 2 —, —O—, —NR′CONR′—, —OCONR′—, —NR′CO—, —S—, —NR′—, —SO 2 NR′—, NR′SO 2 —, or —NR′SO 2 NR′—.
65 . The compound according to claim 63 , wherein G 4 is hydrogen, and G 5 is cyano, methyl, ethyl, propyl, isopropyl, butyl, sec-butyl, t-butyl, cyanomethyl, methoxyethyl, CH 2 C(O)OMe, (CH 2 ) 2 —NHC(O)O-tert-But, or cyclopentyl.
66 . The compound according to claim 63 , wherein G 5 is hydrogen, and G 4 is halo, C1-C6 aliphatic or phenyl, wherein said aliphatic or phenyl is optionally substituted with C1-C6 alkyl, halo, cyano, or CF 3 , wherein up to two methylene units of said C1-C6 aliphatic or C1-C6 alkyl is optionally replaced with —CO—, —CONR′—, —CO 2 —, —OCO—, —NR′CO 2 —, —O—, —NR′CONR′—, —OCONR′—, —NR′CO—, —S—, —NR′—, —SO 2 NR′—, NR′SO 2 —, or —NR′SO 2 NR′—.
67 . The compound according to claim 63 , wherein G 5 is hydrogen, and G 4 is halo, CF 3 , ethoxycarbonyl, t-butyl, 2-methoxyphenyl, 2-ethoxyphenyl, 4-C(O)NH(CH 2 ) 2 —NMe 2 , 2-methoxy-4-chloro-phenyl, pyridine-3-yl, 4-isopropylphenyl, 2,6-dimethoxyphenyl, sec-butylaminocarbonyl, ethyl, t-butyl, or piperidin-1-ylcarbonyl.
68 . A pharmaceutical composition comprising a compound of formula I according to claim 1 and a pharmaceutically acceptable carrier or adjuvant.
69 . The composition according to claim 68 , wherein said composition comprises an additional agent selected from a mucolytic agent, bronchodialator, an anti-biotic, an anti-infective agent, an anti-inflammatory agent, CFTR modulator, or a nutritional agent.
70 . A method of modulating ABC transporter activity comprising the step of contacting said ABC transporter with a compound of formula (I):
or a pharmaceutically acceptable salt thereof, wherein:
Ar 1 is a 5-6 membered aromatic monocyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, wherein said ring is optionally fused to a 5-12 membered monocyclic or bicyclic, aromatic, partially unsaturated, or saturated ring, wherein each ring contains 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, wherein Ar 1 has m substituents each independently selected from WR W ;
W is a bond or is an optionally substituted C 1 -C 6 alkylidene chain wherein up to two methylene units of W are optionally and independently replaced by —CO—, —CS—, —COCO—, —CONR′—, —CONR′NR′—, —CO 2 —, —OCO—, —NR′CO 2 —, —O—, —NR′CONR′—, —OCONR′—, —NR′NR′, —NR′NR′CO—, —NR′CO—, —S—, —SO, —SO 2 —, —NR′—, —SO 2 NR′—, NR′SO 2 —, —NR′SO 2 NR′—;
R W is independently R′, halo, NO 2 , CN, CF 3 , or OCF 3 ;
m is 0-5;
each of R 1 , R 2 , R 3 , R 4 , and R 5 is independently —X—R X ;
X is a bond or is an optionally substituted C 1 -C 6 alkylidene chain wherein up to two methylene units of X are optionally and independently replaced by —CO—, —CS—, —COCO—, —CONR′—, —CONR′NR′—, —CO 2 —, —OCO—, —NR′CO 2 —, —O—, —NR′CONR′—, —OCONR′—, —NR′NR′, —NR′NR′CO—, —NR′CO—, —S—, —SO, —SO 2 —, —NR′—, —SO 2 NR′—, NR′SO 2 —, or —NR′SO 2 NR′—;
R X is independently R′, halo, NO 2 , CN, CF 3 , or OCF 3 ;
R 6 is hydrogen, CF 3 , —OR′, —SR′, or an optionally substituted C 1-8 aliphatic group;
R 7 is hydrogen or a C 1-6 aliphatic group optionally substituted with —X—R X ;
R′ is independently selected from hydrogen or an optionally substituted group selected from a C 1 -C 8 aliphatic group, a 3-8-membered saturated, partially unsaturated, or fully unsaturated monocyclic ring having 0-3 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or an 8-12 membered saturated, partially unsaturated, or fully unsaturated bicyclic ring system having 0-5 heteroatoms independently selected from nitrogen, oxygen, or sulfur; or two occurrences of R′ are taken together with the atom(s) to which they are bound to form an optionally substituted 3-12 membered saturated, partially unsaturated, or fully unsaturated monocyclic or bicyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
71 . The method according to claim 70 , wherein said ABC transporter is CFTR.
72 . A method of treating or lessening the severity of a disease in a patient, wherein said disease is selected from cystic fibrosis, hereditary emphysema, hereditary hemochromatosis, coagulation-fibrinolysis deficiencies, such as protein C deficiency, Type 1 hereditary angioedema, lipid processing deficiencies, such as familial hypercholesterolemia, Type 1 chylomicronemia, abetalipoproteinemia, lysosomal storage diseases, such as I-cell disease/pseudo-Hurler, mucopolysaccharidoses, Sandhof/Tay-Sachs, Crigler-Najjar type II, polyendocrinopathy/hyperinsulemia, Diabetes mellitus, Laron dwarfism, myleoperoxidase deficiency, primary hypoparathyroidism, melanoma, glycanosis CDG type 1, congenital hyperthyroidism, osteogenesis imperfecta, hereditary hypofibrinogenemia, ACT deficiency, Diabetes insipidus (DI), neurophyseal DI, neprogenic DI, Charcot-Marie Tooth syndrome, Perlizaeus-Merzbacher disease, neurodegenerative diseases such as Alzheimer's disease, Parkinson's disease, amyotrophic lateral sclerosis, progressive supranuclear plasy, Pick's disease, several polyglutamine neurological disorders such as Huntington, spinocerebullar ataxia type I, spinal and bulbar muscular atrophy, dentatorubal pallidoluysian, and myotonic dystrophy, as well as spongiform encephalopathies, such as hereditary Creutzfeldt-Jakob disease (due to prion protein processing defect), Fabry disease, Straussler-Scheinker syndrome, COPD, dry-eye disease, or Sjogren's disease, said method comprising the step of administering to said patient an effective amount of a compound of formula I according to claim 70 .
73 . A kit for use in measuring the activity of a ABC transporter or a fragment thereof in a biological sample in vitro or in vivo, comprising:
(i) a composition comprising a compound of formula (I) according to claim 70 ; (ii) instructions for:
a) contacting the composition with the biological sample;
b) measuring activity of said ABC transporter or a fragment thereof.
74 . The kit of claim 73 , further comprising instructions for
a) contacting an additional composition with the biological sample; b) measuring the activity of said ABC transporter or a fragment thereof in the presence of said additional compound, and c) comparing the activity of the ABC transporter in the presence of the additional compound with the density of the ABC transporter in the presence of a composition of formula (I).
75 . The kit of claim 74 , wherein the kit is used to measure the density of CFTR.Join the waitlist — get patent alerts
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