US2013231298A1PendingUtilityA1

Anti-bacterial activity of 9-hydroxy derivatives of 6,11-bicyclolides

Assignee: ENANTA PHARM INCPriority: May 9, 2008Filed: Feb 22, 2013Published: Sep 5, 2013
Est. expiryMay 9, 2028(~1.8 yrs left)· nominal 20-yr term from priority
A61P 29/00A61P 31/04A61K 31/706C07H 17/08A61K 31/7056
50
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Claims

Abstract

The present invention discloses compounds of formula (I) or pharmaceutically acceptable salts, esters, or prodrugs thereof: which exhibit superior antibacterial properties, particularly against Haemophilus influenzae . The present invention further relates to pharmaceutical compositions comprising the aforementioned compounds for administration to a subject in need of antibiotic treatment. The invention also relates to methods of treating a bacterial infection in a subject by administering a pharmaceutical composition comprising the compounds of the present invention. The invention further includes process by which to make the compounds of the present invention.

Claims

exact text as granted — not AI-modified
What is claimed is: 
     
         1 . Compounds represented by formula (I): 
       
         
           
           
               
               
           
         
         or a racemate, enantiomer, diastereomer, geometric isomer, tautomer, solvate, pharmaceutically acceptable salt, ester and prodrug thereof, 
         wherein V is selected from the group consisting of:
 (a) —R 1 —, where R 1  is substituted or unsubstituted —C 1 -C 8  alkylene-, —C 2 -C 8  alkenylene- or —C 2 -C 8  alkynylene- each containing 0, 1, 2, or 3 heteroatoms selected from O, S or N; 
 (b) —R 1 —(C═O)—R 2 —, where R 2  is independently selected from R 1 ; 
 (c) —R 1 —(C═N-E-R 3 )—R 2 —, where E is absent, O, NH, NH(C═O), NH(C═O)NH or NHSO 2 ; where R 3  is independently selected from the group consisting of:
 (i) hydrogen; 
 (ii) aryl; substituted aryl; heteroaryl; substituted heteroaryl; 
 (iii) —R 4 , where R 4  is substituted or unsubstituted —C 1 -C 8  alkyl, —C 2 -C 8  alkenyl or —C 2 -C 8  alkynyl each containing 0, 1, 2, or 3 heteroatoms selected from O, S or N; and 
 (iv) —R 5 , where R 5  is substituted and unsubstituted —C 3 -C 12  cycloalkyl each containing 0, 1, 2, or 3 heteroatoms selected from O, S or N; 
 
 (d) —R 1 —(C═CH-J-R 6 )—R 2 —; where J is absent, O, CO, SO 2 , NH, NH(C═O), NH(C═O)NH or NHSO 2 ; and wherein R 6  is independently selected from halogen and R 3 ; 
 (e) —R 1 —[C(OR 7 )(OR 8 )]—R 2 —, where R 7  and R 8  are selected from the group consisting of C 1 -C 12  alkyl, aryl or substituted aryl; or R 7  and R 8  taken together is —(CR a R b ) r —, where r is 2 or 3; R a  and R b  are independently selected from hydrogen, aryl, and R 4 ; or 
 (f) —R 1 —[C(SR 7 )(SR 8 )]—R 2 —; 
 
         R is selected from the group consisting of:
 (a) —R 3 ; 
 (b) —C(O)R 3 ; 
 (c) —C(O)OR 3 ; 
 (d) —S(O) 2 R 3 ; 
 (e) hydroxy prodrug group; 
 (f) hydroxy protecting group; and 
 (g) —C(O)N(R 9 R 10 ); where R 9  and R 10  are each independently selected from R 3 ;
 alternatively, R 9  and R 10  taken together with the nitrogen atom to which they are connected form a substituted or unsubstituted 3- to 10-membered ring which may optionally contain one or more heterofunctions selected from the group consisting of: —O—, —N(R 3 )—, —S(O) n —, wherein n=0, 1 or 2; 
 
 
         W is selected from:
 (a) hydrogen; 
 (b) hydroxy prodrug group; 
 (c) —R 4 ; 
 (d) —C(O)R 3 ; 
 (e) —C(O)O—R 3 ; and 
 (f) —C(O)N(R 9 R 10 ); 
 
         one of A and B is R u  and the other is OR 11 , wherein R 11  is independently selected from:
 (a) hydrogen; 
 (b) —R 4 ; 
 (c) —C(O)R 3 ; 
 (d) —C(O)NHR 3 ; 
 (e) —S(O) 2 R 3 ; 
 (f) monosaccharide; and 
 (g) -disaccharide; 
 
         alternatively, A and B taken together with the carbon atom to which they are attached to form:
 (a) C═O; or 
 (b) C═CH-J-R 6 ; 
 
         L is independently selected from R 4 ; 
         Q is:
 (a) —R 3 ; 
 (b) —(C═O)R 3 ; 
 (c) —(C═O)NHR 3 ; 
 (d) —(C═O)OR 3 ; 
 (e) —(SO) 2 R 3 ; 
 (f) monosaccharide; 
 (g) disaccharide; or 
 (h) trisaccharide; 
 
         Z is:
 (a) hydrogen; 
 (b) —N 3 ; 
 (c) —CN; 
 (d) —NO 2 ; 
 (e) —CONH 2 ; 
 (f) —COOH; 
 (g) —CHO; 
 (h) —R 4 ; 
 (i) —COOR 4 ; 
 (j) —(C═O)R 4 ; or 
 (k) —(C═O)NR 9 R 10 ; and 
 
         each of X and Y is independently:
 a) hydrogen; 
 b) hydroxy; 
 c) halogen; or 
 d) —R 4 . 
 
       
     
     
         2 . A compound according to  claim 1  represented by formula (II): 
       
         
           
           
               
               
           
         
         or a pharmaceutically acceptable salt, ester or salt thereof, where Z 1  and Z 2  are independently selected from:
 (a) hydrogen; 
 (b) deuterium; 
 (c) halogen; 
 (d) —R 3 , where R 3  is independently selected from the group consisting of:
 (i) hydrogen; 
 (ii) aryl; substituted aryl; heteroaryl; substituted heteroaryl; and 
 (iii) —R 4 , where R 4  is substituted or unsubstituted —C 1 -C 6  alkyl, —C 2 -C 6  alkenyl, or —C 2 -C 6  alkynyl each containing 0, 1, 2, or 3 heteroatoms selected from O, S or N; and 
 (iv) —R 5 , where R 5  is substituted and unsubstituted —C 3 -C 12  cycloalkyl each containing 0, 1, 2, or 3 heteroatoms selected from O, S or N; 
 
 (e) —C(O)-J 1 -R 3 , wherein J 1  is absent, O, or S and R 3  is as previously defined; 
 (f) —OR 3 ; 
 (g) —O(C═O)R 3 ; 
 (h) —O(C═O)OR 3 ; 
 (i) —O(C═O)NHR 3 ; 
 (j) —NH(C═O)R 3 ; 
 (k) —NH(C═O)NHR 3 ; 
 (l) —NH(C═O)OR 3 ; 
 (m)—NH(SO 2 )R 3 ; 
 (n) —NH(SO 2 )NHR 3 ; 
 (o) —NR 9 R 10 , where R 9  and R 10  are each independently selected from R 3 ;
 alternatively, R 9  and R 10  taken together with the nitrogen atom to which they are connected form a 3- to 10-membered ring which may optionally contain one or more heterofunctions selected from the group consisting of: —O—, —N(R 3 )—, —S(O) n —, wherein n=0, 1 or 2; and 
 
 (p) —C(O)—NR 9 R 10 ; 
 
         alternatively, Z 1  and Z 2  taken together with the carbon atom to which they are attached are:
 (a) C═O; 
 (b) C(OR 7 )(OR 8 ), where R 7  and R 8  are selected from the group consisting of C 1 -C 12  alkyl, aryl or substituted aryl; or R 7  and R 8  taken together is —(CR a R b ) r —, where r is 2 or 3; R a  and R b  are independently selected from hydrogen, aryl, and R 4 ; 
 (c) C(SR 7 )(SR 8 ); 
 (d) C═CHR 3 , where R 3  is as previously defined; or 
 (e) C═N-E-R 3 , where E is absent, O, NH, NH(C═O), NH(C═O)NH or NHSO 2 ; 
 
         R p  is hydrogen, hydroxy protecting group, ester or hydroxy prodrug group; and A, B, R, W, Y, R 9 , and R 10  are as previously defined in  claim 1 . 
       
     
     
         3 . A compound according to  claim 2  represented by formula (III): 
       
         
           
           
               
               
           
         
         or a pharmaceutically acceptable salt, ester or prodrug thereof where R, W, Z 1 , Z 2 , Rp, R 9  and R 10  are as previously defined in  claim 2 . 
       
     
     
         4 . A compound according to  claim 2  represented by formula (IV): 
       
         
           
           
               
               
           
         
         or a pharmaceutically acceptable salt, ester or salt thereof, where R, W, Y, Z 1 , Z 2 , Rp, R 9  and R 10  are as previously defined in  claim 2 . 
       
     
     
         5 . A compound according to  claim 1  represented by formula (V): 
       
         
           
           
               
               
           
         
         or a pharmaceutically acceptable salt, ester or prodrug thereof where W, R, Y, Rp, R 3 , R 9  and R 10  are as previously defined in  claim 1 . 
       
     
     
         6 . A compound according to  claim 1  represented by formula (VI): 
       
         
           
           
               
               
           
         
         or a pharmaceutically acceptable salt, ester or prodrug thereof where W, R, Y, Rp, R 6 , R 9  and R 10  are as previously defined in  claim 1 . 
       
     
     
         7 . A compound of  claim 1  having the Formula A, selected from compounds 1-28 of Table 1: 
       
         
           
           
               
               
           
         
         wherein Y and R 3  is delineated for each example in Table 1: 
       
       
         
           
                 
                 
                 
                 
               
                     
                   TABLE 1 
                 
                     
                     
                 
                     
                   Compound No. 
                   Y 
                   —R 3   
                 
                     
                     
                 
                     
                   (1) 
                   H 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (2) 
                   H 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (3) 
                   H 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (4) 
                   H 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (5) 
                   H 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (6) 
                   H 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (7) 
                   H 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (8) 
                   H 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (9) 
                   H 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (10) 
                   F 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (11) 
                   F 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (12) 
                   F 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (13) 
                   F 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (14) 
                   F 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (15) 
                   F 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (16) 
                   F 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (17) 
                   F 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (18) 
                   F 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (19) 
                   H 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (20) 
                   H 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (21) 
                   F 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (22) 
                   F 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (23) 
                   F 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (24) 
                   F 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (25) 
                   F 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (26) 
                   H 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (27) 
                   H 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
                     
                   (28) 
                   H 
                   
                     
                       
                       
                           
                           
                       
                     
                   
                 
                     
                     
                 
             
                
                
                
                
               
               
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
                
               
            
           
         
       
     
     
         8 . A pharmaceutical composition comprising a therapeutically effective amount of a compound of  claim 1  or a pharmaceutically acceptable salt, ester or prodrug thereof, in combination with a pharmaceutically acceptable carrier. 
     
     
         9 . A method for treating a bacterial infection in a subject, comprising administering to said subject a therapeutically effective amount of a pharmaceutical composition according to  claim 8 . 
     
     
         10 . A method of treating cystic fibrosis in subject, comprising administering to said subject, a therapeutically effective amount of a pharmaceutical composition of  claim 8 . 
     
     
         11 . A method of treating inflammation in a subject comprising administering to said subject, therapeutically effective amount of a pharmaceutical composition of  claim 8 . 
     
     
         12 . A process for preparing a compound of formula I, comprising the step of:
 (a) reacting a compound represented by the formula   
       
         
           
           
               
               
           
         
       
       wherein R, A, B, X, Y and PG are as defined in  claim 1 , with alkylating agent of formula 
       
         
           
           
               
               
           
         
       
       where R 50  is —C 1 -C 12  alkyl, —C 1 -C 12  alkenyl, or —C 1 -C 12  alkynyl, in the presence of a palladium catalyst;
 (b) oxidizing the double bond to the corresponding ketone; 
 (c) reacting the compound from step (b) with R 3 ONH 2 , where R 3  is defined in  claim 1 , in the presence of an acid or a base; and 
 (d) optionally deprotecting the compound from step (c).

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