US2006035323A2PendingUtilityA2

Method for producing sweetners and alcohol

Assignee: NOVOZYMES ASPriority: Feb 3, 1995Filed: Feb 12, 2004Published: Feb 16, 2006
Est. expiryFeb 3, 2015(expired)· nominal 20-yr term from priority
D06L 1/14C11D 3/38681C11D 3/38618C12N 9/2417C12Y 302/01001C11D 3/38609
54
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Claims

Abstract

Abstract of the Disclosure The present invention relates to variants of a parent α-amylase, which parent α-amylase (i) has an amino acid sequence selected from the amino acid sequences shown in SEQ ID No. 1, SEQ ID No. 2, SEQ ID No. 3, and SEQ ID No. 7, respectively; or (ii) displays at least 80% homology with one or more of these amino acid sequences; and/or displays immunological cross-reactivity with an antibody raised against an α-amylase having one of these amino acid sequences; and/or is encoded by a DNA sequence which hybridizes with the same probe as a DNA sequence encoding an α-amylase having one of these amino acid sequences; in which variant:(a) at least one amino acid residue of the parent α-amylase has been deleted; and/or(b) at least one amino acid residue of the parent α-amylase has been replaced by a different amino acid residue; and/or(c) at least one amino acid residue has been inserted relative to the parent α-amylase;the variant having α-amylase activity and exhibiting at least one of the following properties relative to the parent α-amylase: increased thermostability; increased stability towards oxidation; and reduced Ca 2+ dependency;with the proviso that the amino acid sequence of the variant is not identical to any of the amino acid sequences shown in SEQ ID No. 1, SEQ ID No. 2, SEQ ID No. 3 and SEQ ID No. 7, respectively.

Claims

exact text as granted — not AI-modified
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         117.  Cancelled.   
     
     
         118.  A nucleic acid encoding a variant of a parent  Bacillus stearothermophilus  alpha-amylase, wherein the variant has an amino acid sequence which has at least 95% homology to the parent  Bacillus stearothermophilus  alpha-amylase and comprises a deletion of amino acids 179 and 180, using SEQ ID NO:3 for numbering, and wherein the variant has alpha-amylase activity 
     
     
         119.  The nucleic acid of  claim 118 , wherein the variant further comprises a substitution of a cysteine at amino acids 349 and 428, using SEQ ID NO:3 for numbering. 
     
     
         120.  A nucleic acid construct comprising the nucleic acid of  claim 118  operably linked to one or more control sequences that direct the production of the variant in a suitable expression host. 
     
     
         121.  The nucleic acid construct of  claim 120 , wherein one or more control sequence directs the production of the variant in a bacterial host. 
     
     
         122.  The nucleic acid construct of  claim 120 , wherein one or more control sequence directs the production of the variant in a fungal host. 
     
     
         123.  A recombinant expression vector comprising the nucleic acid construct of  claim 120 . 
     
     
         124.  A recombinant host cell comprising the nucleic acid construct of  claim 120 . 
     
     
         125.  The recombinant host cell of  claim 124 , wherein the host cell is a bacterial cell. 
     
     
         126.  The recombinant host cell of  claim 124 , wherein the host cell is a fungal cell. 
     
     
         127.  The recombinant host cell of  claim 124 , wherein the host cell is a yeast cell. 
     
     
         128.  The recombinant host cell of  claim 124 , wherein the host cell is a species of  Bacillus . 
     
     
         129.  The recombinant host cell of  claim 124 , wherein the host cell is selected from the group consisting of Bacillus subtilis,  Bacillus lentus, Bacillus brevis, Bacillus stearothermophilus, Bacillus alkalophilus, Bacillus amyloliquefaciens, Bacillus coagulans, Bacillus circulans, Bacillus lautus, Bacillus megaterium, Bacillus thuringiensis, Streptomyces lividans and Streptomyces murinus.  
     
     
         130.  The recombinant host cell of  claim 124 , wherein the host cell is  Bacillus licheniformis.   
         
     
     
         131.  A method for producing a variant alpha-amylase, which method comprises:  (a) cultivating a host cell comprising the nucleic acid of  claim 118  and (b) recovering the variant alpha-amylase from the host cell. 
     
     
         132.  The method of  claim 131 , wherein the host cell is a bacterial cell. 
     
     
         133.  The method of  claim 131 , wherein the host cell is a fungal cell. 
     
     
         134.  The method of  claim 131 , wherein the host cell is a yeast cell. 
     
     
         135.  The method of  claim 131 , wherein the host cell is a species of  Bacillus . 
     
     
         136.  The method of  claim 131 , wherein the host cell is selected from the group consisting of Bacillus subtilis,  Bacillus lentus, Bacillus brevis, Bacillus stearothermophilus, Bacillus alkalophilus, Bacillus amyloliquefaciens, Bacillus coagulans, Bacillus circulans, Bacillus lautus, Bacillus megaterium, Bacillus thuringiensis, Streptomyces lividans and Streptomyces murinus.  
     
     
         137.  The method of  claim 131 , wherein the host cell is  Bacillus licheniformis.   
         
     
     
         138.  The method of  claim 131 , wherein the variant alpha-amylase is secreted from the host cell. 
     
     
         139.  A nucleic acid encoding a variant alpha-amylase, wherein the variant has at least 95% homology to SEQ ID NO:3 and comprises a deletion of amino acids 179 and 180, using SEQ ID NO:3 for numbering, and wherein the variant has alpha-amylase activity .   
     
     
         140.  A nucleic acid of  claim 139 , wherein the variant further comprises a substitution of a cysteine at amino acids 349 and 428, using SEQ ID NO:3 for numbering. 
     
     
         141.  A nucleic acid construct comprising the nucleic acid of  claim 139  operably linked to one or more control sequences that direct the production of the variant in a suitable expression host.  
     
     
         142.  A nucleic acid construct of  claim 141 , wherein one or more control sequence directs the production of the variant in a bacterial host.  
     
     
         143.  A nucleic acid construct of  claim 141 , wherein one or more control sequence directs the production of the variant in a fungal host  
     
     
         144.  A recombinant expression vector comprising the nucleic acid of  claim 139 . 
     
     
         145.  A recombinant host cell comprising the nucleic acid construct of  claim 141 . 
     
     
         146.  The recombinant host cell of  claim 145 , wherein the host cell is a bacterial cell. 
     
     
         147.  The recombinant host cell of  claim 145 , wherein the host cell is a fungal cell. 
     
     
         148.  The recombinant host cell of  claim 145 , wherein the host cell is a yeast cell. 
     
     
         149.  The recombinant host cell of  claim 145 , wherein the host cell is a species of  Bacillus.   
     
     
         150.  The recombinant host cell of  claim 145 , wherein the host cell is selected from the group consisting of Bacillus subtilis,  Bacillus lentus, Bacillus brevis, Bacillus stearothermophilus, Bacillus alkalophilus, Bacillus amyloliquefaciens, Bacillus coagulans, Bacillus circulans, Bacillus lautus, Bacillus megaterium, Bacillus thuringiensis, Streptomyces lividans and Streptomyces murinus.  
     
     
         151.  The recombinant host cell of  claim 145 , wherein the host cell is  Bacillus licheniformis.   
         
     
     
         152.  A method for expressing a variant alpha-amylase, which method comprises:  (a) cultivating a host cell comprising the nucleic acid of  claim 139  and (b) recovering the variant alpha-amylase from the host cell. 
     
     
         153.  The method of  claim 152 , wherein the host cell is a bacterial cell. 
     
     
         154.  The method of  claim 152 , wherein the host cell is a fungal cell. 
     
     
         155.  The method of  claim 152 , wherein the host cell is a yeast cell. 
     
     
         156.  The method of  claim 152 , wherein the host cell is a species of  Bacillus . 
     
     
         157.  The method of  claim 152 , wherein the host cell is selected from the group consisting of Bacillus subtilis,  Bacillus lentus, Bacillus brevis, Bacillus stearothermophilus, Bacillus alkalophilus, Bacillus amyloliquefaciens, Bacillus coagulans, Bacillus circulans, Bacillus lautus, Bacillus megaterium, Bacillus thuringiensis, Streptomyces lividans and Streptomyces murinus.  
     
     
         158.  The method of  claim 152 , wherein the host cell is  Bacillus licheniformis.   
         
     
     
         159.  The method of  claim 152 , wherein the variant alpha-amylase is secreted from the host cell. 
     
     
         160.  A nucleic acid sequence encoding a variant of a  Bacillus stearothermophilus  alpha-amylase, wherein the alpha-amylase variant consists of a deletion of amino acids 179 and 180, using SEQ ID NO:3 for numbering.   
     
     
         161.  A nucleic construct comprising the nucleic sequence of  claim 160  operably linked to one or more control sequence that direct the production of the variant in a suitable expression host. 
     
     
         162.  The nucleic acid construct of  claim 161 , wherein one or more control sequences directs the production of the variant in a bacterial host. 
     
     
         163.  The nucleic acid construct of  claim 161 , wherein one or more control sequence directs the production of the variant in a fungal host. 
     
     
         164.  A recombinant expression vector comprising the nucleic acid construct of  claim 161 .  
     
     
         165.  A recombinant host cell comprising the nucleic construct of  claim 161 . 
     
     
         166.  The recombinant host cell of  claim 165 , wherein the host cell is a bacterial cell.  
     
     
         167.  The recombinant host cell of  claim 165 , wherein the host cell is a fungal cell. 
     
     
         168.  The recombinant host cell of  claim 165 , wherein the host cell is a yeast cell.  
         
     
     
         169.  The recombinant host cell of  claim 165 , wherein the host cell is a species of  Bacillus.    
     
     
         170.  The recombinant host cell of  claim 165 , wherein the host cell is selected from the group consisting of Bacillus subtilis,  Bacillus lentus, Bacillus brevis, Bacillus stearothermophilus, Bacillus alkalophilus, Bacillus amyloliquefaciens, Bacillus coagulans, Bacillus circulans, Bacillus lautus, Bacillus megaterium, Bacillus thuringiensis, Streptomyces lividans and Streptomyces murinus.  
     
     
         171.  The recombinant host cell of  claim 165 , wherein the host cell is  Bacillus licheniformis.   
         
     
     
         172.  A method for producing a variant alpha-amylase, which method comprises:  
       (a) cultivating a host cell comprising the nucleic acid of  claim 160  and (b) recovering the variant alpha-amylase from the host cell. 
     
     
         173.  The method of  claim 172 , wherein the host cell is a bacterial cell. 
     
     
         174.  The method of  claim 172 , wherein the host cell is a fungal cell. 
     
     
         175.  The method of  claim 172 , wherein the host cell is a yeast cell. 
     
     
         176.  The method of  claim 172 , wherein the host cell is a species of  Bacillus . 
     
     
         177.  The method of  claim 172 , wherein the host cell is selected from the group consisting of Bacillus subtilis,  Bacillus lentus, Bacillus brevis, Bacillus stearothermophilus, Bacillus alkalophilus, Bacillus amyloliquefaciens, Bacillus coagulans, Bacillus circulans, Bacillus lautus, Bacillus megaterium, Bacillus thuringiensis, Streptomyces lividans and Streptomyces murinus.  
     
     
         178.  The method of  claim 172 , wherein the host cell is  Bacillus licheniformis.   
         
     
     
         179.  The method of  claim 172 , wherein the variant alpha-amylase is secreted from the host cell.

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