Nucleic acids and proteins from cenarchaeum symbiosum

Abstract

The present application relates to nucleic acids and polypeptides from Cenarchaeum symbiosum. Methods of making the polypeptides and antibodies against the polypeptides are also described.

What is claimed is:  
     
         1 . A computer readable medium having stored thereon a sequence selected from the group consisting of a nucleic acid code of SEQID NOS. 1, 2, 5,9, 13,25,27,29, 31,33, 37,41,45, 57, 59, 61, 63, 65, 67,71, 75, 79, 3, 7, 11, 15, 17, 19,21,23, 35, 39, 43,47,49, 51, 53, 55, 69, 73 and 77 and a polypeptide code of SEQ ID NOS. 6, 10, 14, 26,28, 30, 32, 34, 38, 42, 46, 58, 60, 62, 64, 66, 68, 72, 76, 80, 4, 8, 12, 16, 18, 20, 22, 24,36,40,44,48, 50, 52, 54, 56, 70, 74, and 78.  
     
     
         2 . A computer system comprising a processor and a data storage device wherein said data storage device has stored thereon a sequence selected from the group consisting of a nucleic acid code of SEQID NOS. 1,2, 5, 9, 13, 25, 27, 29, 31, 33, 37, 41, 45, 57, 59, 61, 63, 65, 67, 71, 75, 79, 3, 7, 11, 15, 17, 19, 21, 23, 35, 39,43,47,49, 51, 53, 55, 69, 73 and 77 and a polypeptide code of SEQ ID NOS. 6, 10, 14,26,28,30, 32, 34, 38, 42,46, 58, 60, 62, 64, 66, 68, 72, 76, 80, 4, 8, 12, 16, 18, 20, 22, 24, 36, 40, 44, 48, 50, 52, 54, 56, 70, 74, and 78.  
     
     
         3 . The computer system of  claim 2  further comprising a sequence comparer and a data storage device having reference sequences stored thereon.  
     
     
         4 . The computer system of  claim 3  wherein said sequence comparer comprises a computer program which indicates polymorphisms.  
     
     
         5 . The computer system of  claim 2  further comprising an identifier which identifies features in said sequence.  
     
     
         6 . A method for comparing a first sequence to a reference sequence wherein said first sequence is selected from the group consisting of a nucleic acid code of SEQID NOS. 1,2, 5,9, 13,25,27,29, 31,33, 37,41,45, 57, 59, 61,63,65,67,71,75, 79, 3,7, 11, 15, 17, 19, 21, 23, 35, 39, 43, 47, 49, 51, 53, 55, 69, 73 and 77 and a polypeptide code of SEQ ID NOS. 6, 10, 14,26,28, 30, 32, 34, 38, 42,46, 58, 60, 62, 64, 66, 68, 72, 76, 80, 4, 8, 12, 16, 18, 20, 22, 24, 36, 40, 44, 48, 50, 52, 54, 56, 70, 74, and 78 comprising the steps of 
 reading said first sequence and said reference sequence through use of a computer program which compares sequences; and    determining differences between said first sequence and said reference sequence with said computer program.    
     
     
         7 . The method of  claim 6 , wherein said step of determining differences between the first sequence and the reference sequence comprises identifying polymorphisms.  
     
     
         8 . A method for identifying a feature in a sequence selected from the group consisting of a nucleic acid code of SEQID NOS. 1,2, 5, 9, 13, 25, 27, 29, 31, 33, 37, 41, 45, 57, 59, 61, 63, 65, 67, 71, 75, 79, 3, 7, 11, 15, 17, 19, 21, 23, 35, 39, 43, 47,49, 51, 53,55,69,73 and 77 and a polypeptide code of SEQ ID NOS. 6, 10, 14,26,28,30,32, 34, 38, 42, 46, 58, 60, 62, 64, 66, 68, 72, 76, 80, 4, 8, 12, 16, 18, 20, 22, 24, 36, 40, 44, 48, 50, 52, 54, 56, 70, 74, and 78 comprising the steps of: 
 reading said sequence through the use of a computer program which identifies features in sequences; and    identifying features in said sequence with said computer program.